Gene Caci_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1161 
Symbol 
ID8332496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1305831 
End bp1306571 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID644954309 
Producthypothetical protein 
Protein accessionYP_003111928 
Protein GI256390364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCGCAGCGAA CGCGGCAGCC GACACCGCCG CCGCCCGCAT ATCCGCGGCC 
CTCCACACCG CCGTCACCAC CCCCGGCGAC CGCGCCGCCG CCTGGCACGT AGCCGAACTG
ATAGCCGCTG ACTGGTCCGA CCGTCCCCTG ACCGCCACCG CCGCCGACGG CTACACCGAC
GCAGACCTCG ACACCGCCGC CGCCGATCTC GGCCACCCCC TCCCGGCTGC CCTGCGCGAA
GCCCTGAAAC TCTTCGGCCG CCGCGACGAC CTCACCCGCA ACCAGGACCC CCTCGCCACC
CCCAAGGACC TGGAGATCTA CGAGGGCGCC CTCACCTTCC GCGACGAGAA CCAAGGCGTC
TGCACCTGGG GCGTCCTCCT GGCGGACCTG CACCAGGAAG ACCCGCCGAC CTACCTCCGC
CCCGACCTCG CCGACAAGGC CGAGGAGAAG TGGCTGCCCT GGACGGACAA GCTGTCCCTG
GCCCTCGTCG AAGCCCTGAT CACCGAGACG ATCATCGGCG ACGACGAAGA CCTGACCGCC
GCCTGGCAAC CGCGACCCGG CGACGGCCGC CCGGAGGAAA CCGGCCTCAC CGCCCTCCCC
TGCATCCAGC CCGACTGGTA CAAGACCGCC TGGTACGTCG GCGACGACAT CCTCGCCCAC
GTCGCCGACG GTGCCTGGAT CAGTGTCCGG GCACGCTCAC CCGAGGCGCT CCTCACCTAC
ACACTCACCC CACATAATTG A
 
Protein sequence
MTDTAANAAA DTAAARISAA LHTAVTTPGD RAAAWHVAEL IAADWSDRPL TATAADGYTD 
ADLDTAAADL GHPLPAALRE ALKLFGRRDD LTRNQDPLAT PKDLEIYEGA LTFRDENQGV
CTWGVLLADL HQEDPPTYLR PDLADKAEEK WLPWTDKLSL ALVEALITET IIGDDEDLTA
AWQPRPGDGR PEETGLTALP CIQPDWYKTA WYVGDDILAH VADGAWISVR ARSPEALLTY
TLTPHN