Gene Caci_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1143 
Symbol 
ID8332478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1290146 
End bp1290646 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content70% 
IMG OID644954291 
Producthypothetical protein 
Protein accessionYP_003111910 
Protein GI256390346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.689626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGA TCACCGAGCA CCAGATCCGC ACGTGCTTCG TCAACTGCTC CAAGGGCGAG 
GCCCAGCGGC TCGGGCTGCC CCGGGACCTG GCCGAGAAGC CCTGGGCCGA CCTGGACTTC
CTGGGCTGGC GCGACCCGAC CGCCCCCGAG CGCGGCTACC TGGTCGTCCA GCGCGAGGGC
CGCTTGACCG GCATCTCGCT GCGCGCTTCA GGCGGCGGGG CGCGCGGATT CGGCGCCCGC
AGCATGTGCT CGGTCTGCCT GACCACCCGT ACCGGCGGCG GCGTGGTGTT GATGACCGCG
CGGCGGATCG GCGAGGCCGG GCGCCAGGGG AACTCGGTCG GTCAGTATCT GTGCTCTGAT
CTGCAGTGCT CGCTGTTCGC ACGCGGGATC AAGGGCTCGG CGAACGGGCA CGATCTGGAC
GAGTCGATCG ACCTGAACGG CCGGATCGCG CGCACCAACG TCAATCTGCA CTCGTTCCTG
AACCGGATCT TCGCGGCGTA G
 
Protein sequence
MEPITEHQIR TCFVNCSKGE AQRLGLPRDL AEKPWADLDF LGWRDPTAPE RGYLVVQREG 
RLTGISLRAS GGGARGFGAR SMCSVCLTTR TGGGVVLMTA RRIGEAGRQG NSVGQYLCSD
LQCSLFARGI KGSANGHDLD ESIDLNGRIA RTNVNLHSFL NRIFAA