Gene Caci_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1084 
Symbol 
ID8332419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1227971 
End bp1229107 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content71% 
IMG OID644954232 
ProductAntibiotic biosynthesis monooxygenase 
Protein accessionYP_003111851 
Protein GI256390287 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.633077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGA CAGCTCCCGT CCTCGACGAG CGCGCCCGAC CGACCGACTC CCGCTTGCGA 
GTCGTCCTTC TGCTGGACGT CCATGACGGC GAGCAGCAAA GCTTCCTTGA GGCGTACGAG
CAGATGCGCT ACCAGGTCTC GGCAGTGCCC GGGCACCTGA CCGACCAGCT CTGCCAGTCC
ACCGACGACC CGCTGCGCTG GCTCATCACC AGCGAGTGGG AGGCACCCGA GCCGTTCCTG
TCCTGGCTGG ACAGCGCGGA GCACCGGGAG ATGGTCAGGC CTTTGAGCAA GTGTGTCCGA
GACACCAGAT CCCTGCGTTT CACAGTGTTC CGCGAGACGT TCGGAGCGCA GAGCGTCGAC
AGCGTCCTGC CGCCCCGGGA GCGCAAGGGA ACCGGTCCCG TCGCCCTCGG TCCCGGCCCG
GACGGCATCA TCCGGCACGC GCTCACCTTC AACGTGAAGC CGGGCAGCGA GCAGACCGTC
GCCGACATCC TCGCCGGCTA CACCTCCCCG GCGTCCCAGG TGGACGAGAC CACGCGGCTG
GTCCGCACCT CGCTGTTCAT GCGGGGCAAC GAGGTGGTCC GTTCGGTGGA GGTGATGGGC
GACCTGGTCG CCGCGCTGCG CCACGTCGCC GCGCAGCCCG AGGTGCGGGC GGTCGAAGAG
GCGATCAACC CCTACCTGGA GCAGGCCCGG GATCTGAACG ACCCGCTGGC CGCCCGGGAC
TTCTTCATGC GCGCGGCGCT GCCTGCCGTG CACCACCACG CGCGCGCCGG CAAGCCCACC
AAGAAGGCGG AGCCGCAACG CTTCGCCTAC ACCTACCCGG CGCGCTCGGG CTGCGGCGCG
GCGATCGCCG AGTTCCTGGC CCGCCAGGAC CGTGCCGCGA TGGACGACCC CAAGTCCCCG
CTCGTGCGCA GCACCGTGTT CCAGCGCGAG GACCGTGTGG TCCGGATGGT CGACATGACC
GTGCCGGCGA CGACGGACCC GGCGACGGCG CTCGGCGTCA TGAGTCCGCG CGCCGGCGCC
GTGCTGGCCC GGCTGATCCG GACGCCGCCG GACCTGCGCG ACGACGACGG CCGCCGCGCG
GCGATGGCGA ACTGGGAGCT GACGACGATC ACCGACCGGC GCTCGCCGCA GGCCTGA
 
Protein sequence
MAQTAPVLDE RARPTDSRLR VVLLLDVHDG EQQSFLEAYE QMRYQVSAVP GHLTDQLCQS 
TDDPLRWLIT SEWEAPEPFL SWLDSAEHRE MVRPLSKCVR DTRSLRFTVF RETFGAQSVD
SVLPPRERKG TGPVALGPGP DGIIRHALTF NVKPGSEQTV ADILAGYTSP ASQVDETTRL
VRTSLFMRGN EVVRSVEVMG DLVAALRHVA AQPEVRAVEE AINPYLEQAR DLNDPLAARD
FFMRAALPAV HHHARAGKPT KKAEPQRFAY TYPARSGCGA AIAEFLARQD RAAMDDPKSP
LVRSTVFQRE DRVVRMVDMT VPATTDPATA LGVMSPRAGA VLARLIRTPP DLRDDDGRRA
AMANWELTTI TDRRSPQA