Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1072 |
Symbol | |
ID | 8332407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1215659 |
End bp | 1216561 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954220 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003111839 |
Protein GI | 256390275 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.304438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATCG ACATCAGGCT GATGCGTTAC GTGGTCGCCG TGGCCGAGGA GGGCGGGTTC CAGCGCGCGG CCAAGCGGCT CCTGGTCGCG CAGCCGTCGC TGAGCCGGCA GATCCGCGAT CTGGAACGCG AGCTGGGCGT CACGTTGTTC GAGCGGAAGC CGGCGGTACG CCCGACGGAT GCCGGATGCG TCTTCGTCGA GTCCGCGCGC ACGGTATTGG CCGAGACCGA TCGCCTGATC GAGCGGACCA TGCTCGCCGG ACGCGGGGAG CTCGGCACGG TCCGCGTCGG CTACATCCAC TCAGCGGTCC TCGACACCGT CCCGCGGGTC GTCGCGGCGA TGGCGGAGCG GCATCCCGGC GTCACGGTCG ACCTCCGCGA GAACTGGACG CCCGACTTGG ATACCGCGCT GCTGGCCGGT GAATACGACC TCGTACTCTC CCGCGACATG CCGCCGCGTC CGGAATACCA GCGCGAGACG CTTCGACCCG AAGGGCTCGT CGCGGTCGTC GGCGAAAGCC ATCCCCTGGC CGGCCGGGAA GCCGTCGCGC TCCGGGAGTT CGCCGGGCAG CGCTTCTGCC ATCCGCAGCA CAACCTGGCT CCCGGACGCC ACGCCTACAT GATCAATGCG CTGCGACAGT CCGGCGAGAC GTTCGAGTAC CGGGAGAGTC CCGTCCACGG ACTGAGCCAC CTCGACCTGG CCGACGGCCA CAGCTTCGCC CTCGTCCCGG ACAGCGCGGT CGGCCGCGTG CCGGTCGGGA CGGCGACCAT CGTCATCACC GACGACCTGC CCCGCCTGAC CTTGGAGATG GTCTGGCGGC GCGACGCCGT GTCGGCGGCG CTCGGCGTGC TCGTCAGTAC GGCGCGCGAG TTGGCGCGAC GCGAGGGTTG GTTCGTTTCT TGA
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Protein sequence | MAIDIRLMRY VVAVAEEGGF QRAAKRLLVA QPSLSRQIRD LERELGVTLF ERKPAVRPTD AGCVFVESAR TVLAETDRLI ERTMLAGRGE LGTVRVGYIH SAVLDTVPRV VAAMAERHPG VTVDLRENWT PDLDTALLAG EYDLVLSRDM PPRPEYQRET LRPEGLVAVV GESHPLAGRE AVALREFAGQ RFCHPQHNLA PGRHAYMINA LRQSGETFEY RESPVHGLSH LDLADGHSFA LVPDSAVGRV PVGTATIVIT DDLPRLTLEM VWRRDAVSAA LGVLVSTARE LARREGWFVS
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