Gene Caci_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1070 
Symbol 
ID8332405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1213658 
End bp1214650 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content71% 
IMG OID644954218 
ProductAIG2 family protein 
Protein accessionYP_003111837 
Protein GI256390273 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.739308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGACC ACTTGTTGTT CTCGTACGGG ACTTTGCAGC TGCCACGGGT CCAGGTGGCC 
CGGTTCGGGC GTGAGCTCGA CGGCACTCCC GACGCGCTGC CGGGCTTCCG GTTGGATGCG
GCAGGCGACG ACGCGCACCA GGCGGCGGTA CAGTCCGGCG CCCCGGACGA CGCGGTCGAG
GGGACGGTGT TCGCGCTCTC CCCCGCCGAT CTCGCGGCAG CCGACGAGTT CGAGGCCGGC
TACCTCCGCG TTCCGGTCGC GCTGCGCTCG GGGGCGAAGG CGTGGGTCTA TGTCGAGACG
GCGACGGCAG AGGACTTCCG CGTCCGGCAG CTCCTCGACG CGCAGGCCAA CGCCGTCGCG
CTGTTCGACG AGGTGGTCGC GCGCAAGCTG ATCGCCGCCG GGGAGTCCGA GCGCGCGATC
AGCGACCGGA TCCGCGACCT GGCCAACGAG ATGTTCGGCA CCACCCGGCA CTGGCACAAG
CGCATCGTCA GATCCGGTCC GAACACCCTG CTCCCCTATG ACGACAACAC CCCGGACCGG
ATCCTGCGGC ACGACGACAT CGCCTTCGCC GACTTCGGCC CGATCTTCGC CGACTTCGAA
GCCGACCTCG GCCGCACCTA CGTCCTCGGC GACGACCCCG CCAAGCACCG CCTCGCCGCC
GATCTCCCCC GCATCTTCGA AGCCGGCCGC CGCCACTTCG CCGACCACCC CGCCATCACC
GGCGCGGACC TCCACGCCGA GATCGACGCC CTCGCCCGCG CCGCCGGCTG GCAACTGGGC
GGCACGGGCT TCGCCGGACA CCTCGTCGGC GAGTTCCCGC ACGAGGTCAT GGACGCCGAC
AAGATCCAGT CCTACATCGC GCCGGGCAAC ACCACGCCGA TGCGGGGCAC GGACCGCGCG
GGCCGTGTGT GCCACTGGAT CTTGGAGATC CACCTGGTGG ATCCCGCGGG CGAGTTCGGC
GGGTTCTACG AGCAGCTGCT GGATCTGGGC TGA
 
Protein sequence
MPDHLLFSYG TLQLPRVQVA RFGRELDGTP DALPGFRLDA AGDDAHQAAV QSGAPDDAVE 
GTVFALSPAD LAAADEFEAG YLRVPVALRS GAKAWVYVET ATAEDFRVRQ LLDAQANAVA
LFDEVVARKL IAAGESERAI SDRIRDLANE MFGTTRHWHK RIVRSGPNTL LPYDDNTPDR
ILRHDDIAFA DFGPIFADFE ADLGRTYVLG DDPAKHRLAA DLPRIFEAGR RHFADHPAIT
GADLHAEIDA LARAAGWQLG GTGFAGHLVG EFPHEVMDAD KIQSYIAPGN TTPMRGTDRA
GRVCHWILEI HLVDPAGEFG GFYEQLLDLG