Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0978 |
Symbol | |
ID | 8332312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1117103 |
End bp | 1117897 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644954130 |
Product | hypothetical protein |
Protein accession | YP_003111750 |
Protein GI | 256390186 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.377564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0241309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCG TCTTCAACCC CACGATCGCC GCCATCACGC TGCGCGGCCT GCTCGGCAGG CGCCGCTCGC TGCTGATCGC CCTGCCCCCG GCGCTGCTGC TGGCCCTGAC GATCGGGCTG CGCGCCGCCA CGAACATCAA CAGCTCGCAC GACTTCGGCT GGCCCGGCGT CGTCCTGGGC CAGATCGGAC TGGTCACGCT CCTGCCGCTG ACCGCGATGA TCATCGGCAC CTCGGTGCTG GGCACCGAGG TCGACGACGC CTCGATCCTG CACCTGCTGG CCACCCCGGT CAGCCGCGGC ACGGTGATGT TCACCAAGTG GATCGTGGCC TCCGGCGCGA CCCTGGTCTT CGCCGTGGTG CCGATCTCGG CGGCGGCGTT CATCGCCACC TCCGGCTACG TCGACAACCC CGGCCCGCTG GACATGACCT TCACGCCGAT CAAGGGCGAC ACCTCCGAGG CGATCGGCGT CATCGTCGCC GCCGCGGTCG GCGCGATCGT CTACAGCGCG TTCTTCCTGT TCCTGTCGGT GGTGACCAAG CGCTCGGTGG CTGTGACCCT GATCTACATC CTGGTCTGGG AGAGCCTGCT CACCCGGTTT GTCAGCGGTC TGCGACTGCT GTCGATCGGG CAGTACGAAC TCGGCCTGGC CGACAAGATC GGACACCTGC CGAACCTCGG CGCGAACCTC ACGCTGGGCA CCTCGGTGAT CATGTCCGTG CTGTTCACGG TCATCGCGCT GGGCTACGGG ACGCGGCGGC TGCAGTCGTT CCGGGTGTCC GGCGAGGCCG CGTGA
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Protein sequence | MSTVFNPTIA AITLRGLLGR RRSLLIALPP ALLLALTIGL RAATNINSSH DFGWPGVVLG QIGLVTLLPL TAMIIGTSVL GTEVDDASIL HLLATPVSRG TVMFTKWIVA SGATLVFAVV PISAAAFIAT SGYVDNPGPL DMTFTPIKGD TSEAIGVIVA AAVGAIVYSA FFLFLSVVTK RSVAVTLIYI LVWESLLTRF VSGLRLLSIG QYELGLADKI GHLPNLGANL TLGTSVIMSV LFTVIALGYG TRRLQSFRVS GEAA
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