Gene Caci_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0978 
Symbol 
ID8332312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1117103 
End bp1117897 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content68% 
IMG OID644954130 
Producthypothetical protein 
Protein accessionYP_003111750 
Protein GI256390186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.377564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0241309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCG TCTTCAACCC CACGATCGCC GCCATCACGC TGCGCGGCCT GCTCGGCAGG 
CGCCGCTCGC TGCTGATCGC CCTGCCCCCG GCGCTGCTGC TGGCCCTGAC GATCGGGCTG
CGCGCCGCCA CGAACATCAA CAGCTCGCAC GACTTCGGCT GGCCCGGCGT CGTCCTGGGC
CAGATCGGAC TGGTCACGCT CCTGCCGCTG ACCGCGATGA TCATCGGCAC CTCGGTGCTG
GGCACCGAGG TCGACGACGC CTCGATCCTG CACCTGCTGG CCACCCCGGT CAGCCGCGGC
ACGGTGATGT TCACCAAGTG GATCGTGGCC TCCGGCGCGA CCCTGGTCTT CGCCGTGGTG
CCGATCTCGG CGGCGGCGTT CATCGCCACC TCCGGCTACG TCGACAACCC CGGCCCGCTG
GACATGACCT TCACGCCGAT CAAGGGCGAC ACCTCCGAGG CGATCGGCGT CATCGTCGCC
GCCGCGGTCG GCGCGATCGT CTACAGCGCG TTCTTCCTGT TCCTGTCGGT GGTGACCAAG
CGCTCGGTGG CTGTGACCCT GATCTACATC CTGGTCTGGG AGAGCCTGCT CACCCGGTTT
GTCAGCGGTC TGCGACTGCT GTCGATCGGG CAGTACGAAC TCGGCCTGGC CGACAAGATC
GGACACCTGC CGAACCTCGG CGCGAACCTC ACGCTGGGCA CCTCGGTGAT CATGTCCGTG
CTGTTCACGG TCATCGCGCT GGGCTACGGG ACGCGGCGGC TGCAGTCGTT CCGGGTGTCC
GGCGAGGCCG CGTGA
 
Protein sequence
MSTVFNPTIA AITLRGLLGR RRSLLIALPP ALLLALTIGL RAATNINSSH DFGWPGVVLG 
QIGLVTLLPL TAMIIGTSVL GTEVDDASIL HLLATPVSRG TVMFTKWIVA SGATLVFAVV
PISAAAFIAT SGYVDNPGPL DMTFTPIKGD TSEAIGVIVA AAVGAIVYSA FFLFLSVVTK
RSVAVTLIYI LVWESLLTRF VSGLRLLSIG QYELGLADKI GHLPNLGANL TLGTSVIMSV
LFTVIALGYG TRRLQSFRVS GEAA