Gene Caci_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0976 
Symbol 
ID8332310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1115144 
End bp1116106 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content69% 
IMG OID644954128 
Producthypothetical protein 
Protein accessionYP_003111748 
Protein GI256390184 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.023916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCG ACACCGCCCC CGCCGGCTCC CCGCCGTCGG GCGTCATCCA CGACATCGGC 
TACCGCACCT ACACCGGCGA GCGGATCGGC CGGCTGGGCA TCGTCCGTGC CCTGTACTGG
CACAGCCTGC GCGCCGCCTG GGGACTCGGC CGCGGGCCGC GGGCCAAGAT CGTGCCCGTC
CTGGCGTTCG TCATCATGTC GCTGCCGGCC ATCGCGAACG CCTTCGCGGT CTCGCGGACC
GGCGTCCACG CCATCCGCTA CGACGAGTAC ATGTACAGCT TCCAGCTGGT CCTGGTGCTC
TACCTCGCGG CCGTGACCCC GGAGCTGATC TCCCGCGACA TCCGCAACCG CACGCTGCCG
CTGTACTTCT CCCGGCCGCT GCGCCGGACC GACTACCCGA TCGCGAAAGT CAGTGCCCTG
ATCACCGCGA TGCTGGTGCT CACAGCCGGG CCCGAGATCA TGCTCTACGT CGGGACCATC
GGCTCGCTGC ACGGCGGCTC CGCCGTCTGG CGCGAGACCC GGGCGTTCCT CCCCGGTCTG
GAGCTGGCGC TGCTGTACTC CGTCGTGTTC AGCGTGCTGG CGGCGGTGCT GTCCTGCTAC
ACCGGCCGCC GCGCGTTCGC CACCGGCGCC GTCGCAGTGT TCTTTTTCGG TACCTACGTC
ATCTCCTCGG CGATGGTGCG CCTGACCGGC TTCCGGCCGC ACTACCACCA CGTCGGCGAC
GACGGCGGCG GCTACTTCGT GAAGCCGACC TCGCCGGGCG CCGGGCCCAA GGTCTCCGGT
CTGCTCAATC CCGCGAACCT GTTGGAGGGC CTCAAGGAAT GGGTCGTCGG CAAGGCTCCG
GACAACGCCG ACGTGCCCTA TCCCGGCGGC TTCGGCATCG TGTACCTGGC CGCGGTCGTG
CTGCTGTGCG CGCTGGCCTT CTTCCTCCTG ATTCGCCGCT ACCAGAAGGC GAGCCTGCTG
TGA
 
Protein sequence
MSSDTAPAGS PPSGVIHDIG YRTYTGERIG RLGIVRALYW HSLRAAWGLG RGPRAKIVPV 
LAFVIMSLPA IANAFAVSRT GVHAIRYDEY MYSFQLVLVL YLAAVTPELI SRDIRNRTLP
LYFSRPLRRT DYPIAKVSAL ITAMLVLTAG PEIMLYVGTI GSLHGGSAVW RETRAFLPGL
ELALLYSVVF SVLAAVLSCY TGRRAFATGA VAVFFFGTYV ISSAMVRLTG FRPHYHHVGD
DGGGYFVKPT SPGAGPKVSG LLNPANLLEG LKEWVVGKAP DNADVPYPGG FGIVYLAAVV
LLCALAFFLL IRRYQKASLL