Gene Caci_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0942 
SymbolrplX 
ID8332276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1087482 
End bp1087850 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content64% 
IMG OID644954095 
Product50S ribosomal protein L24 
Protein accessionYP_003111715 
Protein GI256390151 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0905403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGTC TGAACATCAA GAAGGGTGAC CTGGTCCAGG TCATCACCGG CAAGGACAAG 
GGTCTTCAGG GCAAGGTCAT CCAGGCCTTC CCGGACACCG AGAAGGTCCT GGTCGAGGGC
GTCAACCGGG TCAAGAAGCA CACCAAGGTC GGCCAGTCCG TCCGCGGGAG CAAGACCGGC
GGCATCATCA CCATCGAGGC CCCGATCCAC GTCTCCAACG TGATGCTGGT CGTCGAGCAC
GAGGGCGTCA AGGTCGTCAC GCGTGTCGGC TACCGCCGCG TGGAGGAGGA GCGCACGCTC
GCCGACGGTT CCACCAAGAC CGTCACGCGC AGCGTCCGTT ACGCCAAGCG CACCGGTAAG
GACATCTGA
 
Protein sequence
MTGLNIKKGD LVQVITGKDK GLQGKVIQAF PDTEKVLVEG VNRVKKHTKV GQSVRGSKTG 
GIITIEAPIH VSNVMLVVEH EGVKVVTRVG YRRVEEERTL ADGSTKTVTR SVRYAKRTGK
DI