Gene Caci_0913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0913 
Symbol 
ID8332247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1060780 
End bp1061562 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content72% 
IMG OID644954066 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003111686 
Protein GI256390122 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.251711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.260144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GAGAACTCGC CGCCATCGCC GGCGTCACCA CCCGCACGGT GCGGTACTAC 
CACCGCGTCG GCCTCCTGCC CGAACCCGAC CGCAGGCTCA ACGGCTATCG CGAGTACGGC
ATGCGCGACG CGGTGACGTT GGTGCGGGTA CGGCGCCTGG TCGAACTGGG CCTGAGCCTG
GACGAGGTCC GCGACGCGCT CGACGACGAC GCGGGCAAGT CCCTGACCGA GATCCTGACG
GAGCTCGACG CGGACCTGGC CCGCCAGGAG ACGGCGATCC GAAAGCGCCG TGCTGCGCTG
GCTGAGTTGC TGGAGCGGAC CAGCTCTGGC GCGGGTCTCG GCGCGGAGGG ACCGGTCTCG
GCGGAGCTGG CGGCACTGTT CGCCGAGATG GCTCAGGCAG GCGCGGATCG CGCGGGACCG
GAGCCGGCTG CGGCGGGCAA GGACCGGGAG CTGCTCGCGA TGCTCGAGGC GAGCACGGGC
CCGGGCCACG CCGAGTGGTT CTCGGCACTG ACCGGAGCGC TCAGCGGCGA TCCAGGGGCA
ATGGCCCGCG CCTACGAGGT CTACGCCAGA TTCGACGACC TCGCCGAGGC GGACACGGAC
GACCCCCGCA TCCCGGAACT GGCAGCGGCC ATGGCGAACA CCATGCCGGA GGGACCCACA
TATGCCGCGG TCCCAAGCGA CGACGGAACG TTCGCCGAGG CATTCTTCGC CGACTTCCCG
CCCGCACAGG CGGAGGTCCT ACGCCGGGCA GCCGAGCTGC TGCGAGAGCG AGGCCGGTCG
TGA
 
Protein sequence
MRIGELAAIA GVTTRTVRYY HRVGLLPEPD RRLNGYREYG MRDAVTLVRV RRLVELGLSL 
DEVRDALDDD AGKSLTEILT ELDADLARQE TAIRKRRAAL AELLERTSSG AGLGAEGPVS
AELAALFAEM AQAGADRAGP EPAAAGKDRE LLAMLEASTG PGHAEWFSAL TGALSGDPGA
MARAYEVYAR FDDLAEADTD DPRIPELAAA MANTMPEGPT YAAVPSDDGT FAEAFFADFP
PAQAEVLRRA AELLRERGRS