Gene Caci_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0882 
Symbol 
ID8332213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1024639 
End bp1025343 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content68% 
IMG OID644954033 
Producthypothetical protein 
Protein accessionYP_003111656 
Protein GI256390092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.160869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.371514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTGCT TCTTCGATCC GGCACACGGC CAGGCATCAG TGAACGTCAT GTGGCAGCCG 
CAGTGGGGGG TGGCACGACC GGTCGAGGTC TGCCAGTACT GCGCGCAGCG CGTCCAGACG
ACCCAGCCGC CGTACTACCA GCCGGTCCAA CAGCAGGGCT ATCCGCAGCA GGGCTATCCC
CAGGCCGGCT ACCCGCAACA GCAGGGCTAC CCGGCGCAGC AGCCGGGGTA CGCGCAGCAG
GGGCAGTACC AGCAGCCGCC GCGCCAGGGG CACAGCACCG GCGCGATGGT CGGCGCCGGC
GCGGCGGGGC TGGTCGGCGG GATGCTGCTG GGCGAGATGC TCGAGGGCGA TGACACCAAG
CGCGACGAGC AGCAGGCGTA CGAGCGCGGC TTCGAGGAGC GCGGCTACGA CGACCAGCGC
AGCGAGTACC AGCAGCAGGA GTTCCAGCAG CAGGAGTTCC AGCGCGACCA GTACCAGCAG
CCCGAATACC AGCAGCCTGA TTATCAGCAA CCGCAATACC AGTCGGAATA CCAGCAGCCT
GAGTACCAGC AGCCTGAGTA CCAGCAGCCC GAGTACCAGC AGCCGGAATA CCAGCAGACC
GACTACGGCA GCGGCGGCGA CTTCGGCACC GACTACAACG CCGGCGGGTT CGACGGCGGC
GGCGACTACA CCAACGACAG CGGGGACAAC GGCGGCTTCT TCTGA
 
Protein sequence
MICFFDPAHG QASVNVMWQP QWGVARPVEV CQYCAQRVQT TQPPYYQPVQ QQGYPQQGYP 
QAGYPQQQGY PAQQPGYAQQ GQYQQPPRQG HSTGAMVGAG AAGLVGGMLL GEMLEGDDTK
RDEQQAYERG FEERGYDDQR SEYQQQEFQQ QEFQRDQYQQ PEYQQPDYQQ PQYQSEYQQP
EYQQPEYQQP EYQQPEYQQT DYGSGGDFGT DYNAGGFDGG GDYTNDSGDN GGFF