| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0871 |
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| Symbol | |
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| ID | 8332201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1010751 |
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| End bp | 1012550 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644954021 |
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| Product | protein of unknown function DUF1271 |
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| Protein accession | YP_003111645 |
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| Protein GI | 256390081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2346] Truncated hemoglobins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.207432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.190699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACGA GTAACGACAC CGACCTGACC ACCCCGACGG CGCTGCTGGC GGGCGCGCGC
CGGCTTGAGC GCCGCGTCGC CGATGCTTTG TCCGGAACCT ATGACGGCGA GATCGACGCC
GAGCTGCTCC GCGGCGCCTC GGTGCAGCTG AACGGATCGG TTATCAGGCC TCTGGCTCTT
CTTGTAGCCG GAACGCTCGA CGACCCCGTT ACCGCCGAGG AGCCGTCGAT CGACGCCGAG
CTCTGGCGTC TCACCCAGGA AGCCACCCGG CTGCGCGCCA CCACTGGCGT GCCCGCTCCG
CTGATCGAGG CTACTGCGGC ACTTCAGGAC CTAGCCTGTC GGCTAGTTCC CGATCCTGCG
GTGGTCGCCG GACGCATCGC ACGGCTGGCC GCGCTACAGG GCGATCTGCC GACCAGCATC
CAGGCGTCGG AGGATGGTCC CTACCTCGTC ACCAATGCCA GCCACTTGAC CACCTGGCTA
GGGGAGCCGT TGCCGCTGCG TCCGCAGATG GCGCTGTGTC GCTGCGGAGG CTCGGCGACC
AAGCCGTTTT GCGACGGCGC GCATGCGACG AACGGCTTCA GCGGCGCCAA GAGTCCGGCA
CGCGTGGCCG ATCGGCGGGA CACGTATCCC GGGCAGCAGG TCACCGTCCT GGACAATCGC
GGGATCTGCG CTCATTCGGG GCTGTGCACC GACCGTCTTC CGACCGTGTT CCGTCAGGGC
CAGGAGCCTT TCGTGGCGCC GAGCGGGGGG CGCATGGACG AGATCGTCCG GGCGGTTCGG
GCGTGTCCGT CGGGCGCCTT GAGTTTTGCG ATCGACGACC GTGAGGCCCG GGAACAAGTC
GACCAGGATC GGCCGGCGGC GATTGAGGTC TCCAAGGACG GTCCCTACCG GGTCACCGGC
TCGATTCCGC TCACCGGTGC TGACGGCGAG CCGGAGCCGC GGAATGCGGG ATCCTCGACC
GAGCACTACA GCTTGTGCCG TTGCGGGCAG TCGCAGAACA AGCCGTTCTG CAGCGGCATG
CACTGGTACG TCGACTTCCA GGATCCGCCC GCGCCCTCGG AGCCGACGCT CTTCCAGTGG
GCCGGCGGGC TGCCGGCGCT GACCAGGATG ACGCGGATCT TCTACGCCAA GCACGTACCG
GCCGATCCGC TGCTCGCGCC GATCTTCGCG AACATGTCGC CGGACCATCC GGAACGCGTG
GCGGCCTGGC TCGGCGAGAC CTTCGGCGGC CCGACCGTGT ACACCGACAC CTACGGCGGC
TACGACCGAA TGGTCGGGCA GCACGCGGGC AAGGGCCTCA GCGAGGAGCA GCGCGCGCGC
TGGGCGCAGC TCATCGTGCG CTCGGCTGAT GAAGCCGGGC TGCCGAGCGA CCCCGAGTTC
CGCGCGGCGT TCGTCTCCTA CATCGAGTGG GGCTCGCGCA TCGCCGTGGA GAACTCCCAG
CCGGGCGCCC ACCCGCCACC GCACATGCCG GTACCGCGCT GGTGGTGGGT GTGCGGCGCG
ACGCCAGATG CCCGAGTCTC CGCTCTCGCC GTACAAACCA ATCCGGAAGG ACCTGTCATG
ACGCTGCCCG CGAACGACGC GCCGCTCAGC TTCGACGCAC ACATCAGGAC CCTGTTCAGG
GAGATGGACA GGCGATCGAT GAAGTTCGTC TTCGACTTGT GGTCGCACGA CGACGTCAGT
CGGCATGCCG AGGCGATCCT CGGCCGGCTC CGGCAAGGGT CGATGCCGTG CGACGGCGCC
TGGCCGAGGG AGAAGACGGA TGTCTTCGAG CGGTGGATTC GGGCTGGGAA ACCTGCCTAA
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| Protein sequence | MTTSNDTDLT TPTALLAGAR RLERRVADAL SGTYDGEIDA ELLRGASVQL NGSVIRPLAL
LVAGTLDDPV TAEEPSIDAE LWRLTQEATR LRATTGVPAP LIEATAALQD LACRLVPDPA
VVAGRIARLA ALQGDLPTSI QASEDGPYLV TNASHLTTWL GEPLPLRPQM ALCRCGGSAT
KPFCDGAHAT NGFSGAKSPA RVADRRDTYP GQQVTVLDNR GICAHSGLCT DRLPTVFRQG
QEPFVAPSGG RMDEIVRAVR ACPSGALSFA IDDREAREQV DQDRPAAIEV SKDGPYRVTG
SIPLTGADGE PEPRNAGSST EHYSLCRCGQ SQNKPFCSGM HWYVDFQDPP APSEPTLFQW
AGGLPALTRM TRIFYAKHVP ADPLLAPIFA NMSPDHPERV AAWLGETFGG PTVYTDTYGG
YDRMVGQHAG KGLSEEQRAR WAQLIVRSAD EAGLPSDPEF RAAFVSYIEW GSRIAVENSQ
PGAHPPPHMP VPRWWWVCGA TPDARVSALA VQTNPEGPVM TLPANDAPLS FDAHIRTLFR
EMDRRSMKFV FDLWSHDDVS RHAEAILGRL RQGSMPCDGA WPREKTDVFE RWIRAGKPA
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