Gene Caci_0864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0864 
Symbol 
ID8332194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1004202 
End bp1005221 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content70% 
IMG OID644954014 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003111638 
Protein GI256390074 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0824219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA TGCGTGCCGC ACGTCTGAAC CTGTCCACCG GGACGCTGAG CGTCGAGGAC 
GTCGAGAAGC CGGCGCCGGG GACCGGCGAG GTGCTGGTCA AGGTCGAGGC GGCGGGCGTC
TGCCTGTCGG ACGTCCACCT GGTCCGCGGC TACTTCGCCA AGCCTCGCCT CCTGGTCGGC
GACACCGTCA CGCTCGGTCA CGAGATCGCG GGCACGGTCG CCGAGGTCGG GCCGGATGTT
ACGGCTTGGA AGCCGGGTGA CCGGGTCGTG CTGCAGGCCG GCGAGGTCCG CGACGGCCAG
GTGTGGACCC GCGGCGTCGA CTACGACGGC GGCTGGGCCG ACTTCGCGCT CGCGCGGCAG
GACACGCTGG TCGCGCTGCC GGATTCCATC CCGTTCGAAC AGGGCGCGAT CATTCCGGAC
GCGGTGTCGA CGCCGTGGGG TGCGATCACC GCGACGGCGC ACGTCGGTCC GGCGCAGTCG
GTCGGCGTGT GGGGGATCGG TGGGCTCGGG GCGCACGCGG TGCAGCTGTT GCGGGCGATC
GGTGCGTGTC CGATCATCGC GATCGACCCT TCGGAGGCCG CGCGGGAGCG TGCCTTGGCC
TTCGGCGCGG ACATCGCGCT GGATTCTGCG GACCCGGAAC TGCGTTCCGC GATCCGTGCG
GCGACTGGTG GTGTCGGGCT GGAGTATGCG TTCGACTTCG CCGGGGTGAC GCCGGTGCGG
GACCAGGCGC TGCGGCAGTT GGCGCCGGGC GGAAAGCTGG TGTTGGTCGG GCTGAGCGGT
CAGCCGATCA CGATCGAGAA CAGCACACGG TTCCAGTCCG CGCAGTATCA GCTGTTGGGG
CACTACGGTT CGCCGGAGGA GTCGGTCGCA CAGTTGATCC GCCTAGAGGC CGGCGGTCGG
CTGAACCTCG CGCGGTCCAT CTCCGGGGTC ATGGGACTGG AGGAGGCTGC CGAGGCGGTC
GAGCGGCTGG AGAAGAAGGT GGGGGATCCG ATCCGGATCG TGTTGCGTCC GTCTCTCTAA
 
Protein sequence
MATMRAARLN LSTGTLSVED VEKPAPGTGE VLVKVEAAGV CLSDVHLVRG YFAKPRLLVG 
DTVTLGHEIA GTVAEVGPDV TAWKPGDRVV LQAGEVRDGQ VWTRGVDYDG GWADFALARQ
DTLVALPDSI PFEQGAIIPD AVSTPWGAIT ATAHVGPAQS VGVWGIGGLG AHAVQLLRAI
GACPIIAIDP SEAARERALA FGADIALDSA DPELRSAIRA ATGGVGLEYA FDFAGVTPVR
DQALRQLAPG GKLVLVGLSG QPITIENSTR FQSAQYQLLG HYGSPEESVA QLIRLEAGGR
LNLARSISGV MGLEEAAEAV ERLEKKVGDP IRIVLRPSL