Gene Caci_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0800 
Symbol 
ID8332130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp931660 
End bp932382 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content71% 
IMG OID644953952 
Productputative integral membrane protein 
Protein accessionYP_003111576 
Protein GI256390012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTCA AATCCCCGGC CGCGACGGAC GGCGCCACCG TGCCGCCCGC TGAGAAGCCC 
ACCTCCTATC GCACCGTCGG ATCCCTCGGG ACCGGTGTGC TGCTGGTGGT CTTCGGCGCG
ATCTTCCTCT TCGCGTTCGG CCTCGGTTCG GACAAGCACC CGGTCGGCAC CACGATCGGC
CTGCTGATGG TGGTCAGCGG CGTGGTCGGC GGCCTGTACC CGGCCGCCTT CAGCCACGCC
GACCGGCTCT CGATCCGCAA TCCCTTCCGC CGCATCGACG TCAGCTGGCC GCGCGTGGGG
TCCATCTCGG CCCGGCTGTC CACGGTCGTG CAGACAGTCG CCGAGGAGGG CAAGCCGCAC
AAGTTCACGG TCTGGGCGAT CCCGGTCTCC ATGCACGAGC GCCGCAAGAA CGACCGCGTG
GTCGCCAAGA AGGTGCGCAG CGCCCGCGCC GAGTCGGCGA AGCGCGCCTC GGGCAGCGGT
GACATCGCCG GCAGCGCGAT GGGTGCCGCC GGCTACGGCC GCCCCAAGAC GCTGCGCGAG
GACCCGATGG AGACCATGGC CTTCGCCGAC CAGGCGGTGG TCGAGATGCG CGACCGGCAG
CGGCTGTGCA CGACCTCGGT GGAGAAGGCC GCGCCGACCA CGGTGACCTG GACCTGGTAC
ACGCTGGCGC CGTTCGGCGT GAGCATCGCG CTGGTCGTGG CGGCGATCGC CGGGGCGTTC
TAG
 
Protein sequence
MRLKSPAATD GATVPPAEKP TSYRTVGSLG TGVLLVVFGA IFLFAFGLGS DKHPVGTTIG 
LLMVVSGVVG GLYPAAFSHA DRLSIRNPFR RIDVSWPRVG SISARLSTVV QTVAEEGKPH
KFTVWAIPVS MHERRKNDRV VAKKVRSARA ESAKRASGSG DIAGSAMGAA GYGRPKTLRE
DPMETMAFAD QAVVEMRDRQ RLCTTSVEKA APTTVTWTWY TLAPFGVSIA LVVAAIAGAF