| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0770 |
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| Symbol | |
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| ID | 8332100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 899824 |
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| End bp | 901605 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644953922 |
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| Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
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| Protein accession | YP_003111546 |
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| Protein GI | 256389982 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.130049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCTC AGATCCACAC TTACGACACC ATCATCGTCG GCGCCGGCGG CGCGGGCATG
CGCGCGGCGC TGGAGTCCTC CAAGCGCAGC CGCACGGCGG TGCTGACCAA GCTGTACCCG
ACCCGCTCCC ACACCGGCGC GGCGCAGGGC GGCATGTGCG CCGCGCTGGC CAACGTCGAG
GACGACAACT GGGAGTGGCA CACCTATGAC ACCGTGAAGG GCGGGGACTA CCTGGTCGAC
CAGGACGCCG CCGAGATCAT GTGCAAGGAG GCGATCGACG CCGTCCTGGA CCTGGAGAAG
ATGGGCCTGC CCTTCTCCCG GACCCCCGAG GGCAAGATCG ACCAGCGGCG CTTCGGCGGC
CACACCAAGG ACCACGGCAA GGCGCCGGTC CACCGGTCCT GCTACGCCGC GGACCGCACC
GGCCACATGA TCCTGCAGAC GCTGTACCAG AACTGCGTCA AGCAGGAAGT CGAGTTCTAC
AACGAGTTCT ACGTCCTGGA CCTGCTCCTG CACGAGGACG CGGACGGCAC CAAGTACGCC
GCCGGCGTCG TGGCGCTGGA GCTGGCCACC GGCGAGATCC ACATCTTCCG CGGCAAGGCC
GTCATCCTGG CCACCGGCGG CTTCGGCAAG GTCTTCAAGA CCACCTCGAA CGCGCACACC
CTGACCGGCG ACGGCATGGG CATCGTGTGG CGCCGCGGGC TGCCGCTGGA GGACATGGAG
TTCTACCAGT TCCACCCGAC CGGCCTGGCG GGCCTGGGCA TCCTGCTCAC CGAGGGCGCC
CGCGGCGAGG GCGGCATCCT GCGCAACGCC GACGGCGAGC GCTTCATGGA GCGCTACGCC
CCGACCATCA AGGACCTGGC ACCCCGCGAC ATCGTCGCGC GCTCCATGGT CCTGGAGGTC
CGCGACGGCC GCGGCGCCGG TCCCAACAAG GACTACGTCT ACCTGGACCT GACGCACCTG
CCGGCCGAGC AGATCGAGGA GAAGCTGCCG GACATCACCG AGTTCGCCCG CACCTACCTC
GGCGTCGAGC CGACCACGGA GCTGGTCCCG GTGTACCCGA CCGCGCACTA CGCGATGGGC
GGCGTGCCGA CCAACATCTC CGGCGAGGTG CTGGCCGACA ACGACACCGT CGTCAAGGGC
ATGTACGCCG CCGGCGAGGT CGCGTGCGTG TCCGTCCACG GTTCCAACCG CCTGGGCACC
AACTCGCTGC TGGACATCAA CGTCTTCGGC CGCCGCGCCG GCATCAACGC CGCCGAGTAC
GCGGTCGGCG CCGAGCTGCA GCCGCTCCCG AGCGAGCCGG AGCAGGCCGT GGTGTCGATG
GTCGAGGGCT TGCGCAATTC CACCGGGCAC GAGCGCGTCG CGCAGATCCG GTCGGAGCTG
CAGACCACGA TGGACCAGAA CGCCGGCGTG TACCGCAACG ACGAGACGCT GGCGCAGGCC
GAGAAGGACG TCAAGGAACT GCAGCGCCGG TACCGCGACG TCGCGGTCCA GGACAAGGGC
AAGCGGTTCA ACACCGACCT GCTGGAGGCC GTCGAGCTCG GCTTCCTGCT CGACCTGGCG
GAGATCCTGG TCCTCGGCGC CCGCAACCGG ACCGAGTCCC GCGGCGCGCA GGCGCGCGAG
GACTACCCGA CGCGGGACGA CGTGAACTGG CAGAAGCACA CCATGGCCTA CCGGGAGAAG
GACGGCGAGG GCGATGCTGG GTCCGATCAG AACTACAGGA TCCGCCTGGA CTACAAGCCC
GTCATCGTGA CCCGCTACCA GCCGACGGAG CGTAAGTACT GA
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| Protein sequence | MAPQIHTYDT IIVGAGGAGM RAALESSKRS RTAVLTKLYP TRSHTGAAQG GMCAALANVE
DDNWEWHTYD TVKGGDYLVD QDAAEIMCKE AIDAVLDLEK MGLPFSRTPE GKIDQRRFGG
HTKDHGKAPV HRSCYAADRT GHMILQTLYQ NCVKQEVEFY NEFYVLDLLL HEDADGTKYA
AGVVALELAT GEIHIFRGKA VILATGGFGK VFKTTSNAHT LTGDGMGIVW RRGLPLEDME
FYQFHPTGLA GLGILLTEGA RGEGGILRNA DGERFMERYA PTIKDLAPRD IVARSMVLEV
RDGRGAGPNK DYVYLDLTHL PAEQIEEKLP DITEFARTYL GVEPTTELVP VYPTAHYAMG
GVPTNISGEV LADNDTVVKG MYAAGEVACV SVHGSNRLGT NSLLDINVFG RRAGINAAEY
AVGAELQPLP SEPEQAVVSM VEGLRNSTGH ERVAQIRSEL QTTMDQNAGV YRNDETLAQA
EKDVKELQRR YRDVAVQDKG KRFNTDLLEA VELGFLLDLA EILVLGARNR TESRGAQARE
DYPTRDDVNW QKHTMAYREK DGEGDAGSDQ NYRIRLDYKP VIVTRYQPTE RKY
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