Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0724 |
Symbol | |
ID | 8332054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 842611 |
End bp | 843351 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644953876 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003111500 |
Protein GI | 256389936 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0508551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA CCGTCAGCCG TGCCCTGCGC CTGCTCTCCG AGCTGGGTGA GGGCGAGCGT TCGTTGGATC AGTTGGCCGA GGTGATCGGT GTGCATAAGA CCACCGTGCT GCGGTTGTTG CAGTCGCTGG AGGCCGATCG CTTCGTTTAT CGCGATGCCG ACTATCGGTA CCACCTCGGT GCTGGGCTGT TCGCGTTGTC CAGTCTGGCG ATGGAGCAGC GGGGTATTCG GCGGGTTGCT GCGCCTCATC TGGCGGCTTT GAATGCGGCG ACCGGGCAGA CCGTGCACCT CGCTGCGTAT GAGGGTGGCG AGGTCGTCTA CATCGACAAA TACGACTCGC GGCACAAGGT TCGGATGTAC TCGCGGATCG GGTTGCATGC TGGGCTGCAC AACACTGCTG TGGCGAAAGT GCTGCTGGCG GATCTGCCGG TTGGGGAGCG GCGGCGGGTT GTCGCGGGGG TCGAGTTCGT GCCGCATACG CCGAACACCA TCGTTTCGGC GCCGCAGTTG CTCGCTGAGC TGGAGACGGT GGCCGCGCAG GGGTGGGCGC AGGATCACGC CGAGCACGAG ACCTTCATCA ACTGCGTCGG CGCGCCGGTG CGGGACGCGT CCGGGCGGGC TGTGGCGGCG GTGTCGATCT CTGTGCCGGA CGTCGTGTTG CCCTACGAAC AGGTGCTGGA ACTGGTGCCA CAGCTGCTGG ACACCGTGCG TGCCATCTCC GCCGACGCCG GCGCCCCCTG A
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Protein sequence | MSQTVSRALR LLSELGEGER SLDQLAEVIG VHKTTVLRLL QSLEADRFVY RDADYRYHLG AGLFALSSLA MEQRGIRRVA APHLAALNAA TGQTVHLAAY EGGEVVYIDK YDSRHKVRMY SRIGLHAGLH NTAVAKVLLA DLPVGERRRV VAGVEFVPHT PNTIVSAPQL LAELETVAAQ GWAQDHAEHE TFINCVGAPV RDASGRAVAA VSISVPDVVL PYEQVLELVP QLLDTVRAIS ADAGAP
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