Gene Caci_0724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0724 
Symbol 
ID8332054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp842611 
End bp843351 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content66% 
IMG OID644953876 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003111500 
Protein GI256389936 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0508551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA CCGTCAGCCG TGCCCTGCGC CTGCTCTCCG AGCTGGGTGA GGGCGAGCGT 
TCGTTGGATC AGTTGGCCGA GGTGATCGGT GTGCATAAGA CCACCGTGCT GCGGTTGTTG
CAGTCGCTGG AGGCCGATCG CTTCGTTTAT CGCGATGCCG ACTATCGGTA CCACCTCGGT
GCTGGGCTGT TCGCGTTGTC CAGTCTGGCG ATGGAGCAGC GGGGTATTCG GCGGGTTGCT
GCGCCTCATC TGGCGGCTTT GAATGCGGCG ACCGGGCAGA CCGTGCACCT CGCTGCGTAT
GAGGGTGGCG AGGTCGTCTA CATCGACAAA TACGACTCGC GGCACAAGGT TCGGATGTAC
TCGCGGATCG GGTTGCATGC TGGGCTGCAC AACACTGCTG TGGCGAAAGT GCTGCTGGCG
GATCTGCCGG TTGGGGAGCG GCGGCGGGTT GTCGCGGGGG TCGAGTTCGT GCCGCATACG
CCGAACACCA TCGTTTCGGC GCCGCAGTTG CTCGCTGAGC TGGAGACGGT GGCCGCGCAG
GGGTGGGCGC AGGATCACGC CGAGCACGAG ACCTTCATCA ACTGCGTCGG CGCGCCGGTG
CGGGACGCGT CCGGGCGGGC TGTGGCGGCG GTGTCGATCT CTGTGCCGGA CGTCGTGTTG
CCCTACGAAC AGGTGCTGGA ACTGGTGCCA CAGCTGCTGG ACACCGTGCG TGCCATCTCC
GCCGACGCCG GCGCCCCCTG A
 
Protein sequence
MSQTVSRALR LLSELGEGER SLDQLAEVIG VHKTTVLRLL QSLEADRFVY RDADYRYHLG 
AGLFALSSLA MEQRGIRRVA APHLAALNAA TGQTVHLAAY EGGEVVYIDK YDSRHKVRMY
SRIGLHAGLH NTAVAKVLLA DLPVGERRRV VAGVEFVPHT PNTIVSAPQL LAELETVAAQ
GWAQDHAEHE TFINCVGAPV RDASGRAVAA VSISVPDVVL PYEQVLELVP QLLDTVRAIS
ADAGAP