Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0715 |
Symbol | |
ID | 8332045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 834900 |
End bp | 835439 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644953867 |
Product | NUDIX hydrolase |
Protein accession | YP_003111491 |
Protein GI | 256389927 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00338165 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.163674 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGAGC GAATCTGGAC GTTCATCGGG AAGCACGCTG GGGGCGTGCA ATGGCGGATT CTGTGGGTCA GCCAACCCAA GTTCATCGTT GGCGTGTCCG GGCTCGTCAG GAACGAGCAC GGGCAAGTTC TTCTGATTAA GGGCCGCATG TGGAAGCCCT CAAGGCCGTG GGGGTTGGTC ACGGGCTACG CCAAGGGTGG CGAGACCTGG GATCAGACCG TGGTCCGCGA AGCACACGAG GAAACCGGCT ACGTGGTGAA GACGCGACCT GAGCCGGTCG CACTGGTGAC CGGGTTCAAG CTCCGCGCCG AAGCTGTCTT CCTCGGCGAA TTCATCGGAG GCACCTACCG GCCGGACCCC AAAGAGGTTC TCGACGCCGG GTTCTTCGAC ATCGACGCGC TACCTGACGG CTTGCTGCCA TCACATGGAG ACCTGATCCA TCAGTATCGC CATTGGTTCA AGGGGGATGA TCACAACGGG CGTGCTCATG CCGAACGAGA AGCTGGCCGG GACCACGGAG CAGAAGCGGG AGATCTTTGA
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Protein sequence | MRERIWTFIG KHAGGVQWRI LWVSQPKFIV GVSGLVRNEH GQVLLIKGRM WKPSRPWGLV TGYAKGGETW DQTVVREAHE ETGYVVKTRP EPVALVTGFK LRAEAVFLGE FIGGTYRPDP KEVLDAGFFD IDALPDGLLP SHGDLIHQYR HWFKGDDHNG RAHAEREAGR DHGAEAGDL
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