Gene Caci_0715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0715 
Symbol 
ID8332045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp834900 
End bp835439 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content61% 
IMG OID644953867 
ProductNUDIX hydrolase 
Protein accessionYP_003111491 
Protein GI256389927 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00338165 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.163674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGAGC GAATCTGGAC GTTCATCGGG AAGCACGCTG GGGGCGTGCA ATGGCGGATT 
CTGTGGGTCA GCCAACCCAA GTTCATCGTT GGCGTGTCCG GGCTCGTCAG GAACGAGCAC
GGGCAAGTTC TTCTGATTAA GGGCCGCATG TGGAAGCCCT CAAGGCCGTG GGGGTTGGTC
ACGGGCTACG CCAAGGGTGG CGAGACCTGG GATCAGACCG TGGTCCGCGA AGCACACGAG
GAAACCGGCT ACGTGGTGAA GACGCGACCT GAGCCGGTCG CACTGGTGAC CGGGTTCAAG
CTCCGCGCCG AAGCTGTCTT CCTCGGCGAA TTCATCGGAG GCACCTACCG GCCGGACCCC
AAAGAGGTTC TCGACGCCGG GTTCTTCGAC ATCGACGCGC TACCTGACGG CTTGCTGCCA
TCACATGGAG ACCTGATCCA TCAGTATCGC CATTGGTTCA AGGGGGATGA TCACAACGGG
CGTGCTCATG CCGAACGAGA AGCTGGCCGG GACCACGGAG CAGAAGCGGG AGATCTTTGA
 
Protein sequence
MRERIWTFIG KHAGGVQWRI LWVSQPKFIV GVSGLVRNEH GQVLLIKGRM WKPSRPWGLV 
TGYAKGGETW DQTVVREAHE ETGYVVKTRP EPVALVTGFK LRAEAVFLGE FIGGTYRPDP
KEVLDAGFFD IDALPDGLLP SHGDLIHQYR HWFKGDDHNG RAHAEREAGR DHGAEAGDL