| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0713 |
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| Symbol | |
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| ID | 8332043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 831806 |
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| End bp | 833458 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644953865 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit |
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| Protein accession | YP_003111489 |
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| Protein GI | 256389925 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0340597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.16476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACT TCGAGTACGC CGACCTCCTC CCGACGGGGC CGGACGAGAC CCCGTACCGC
CTGCTCACGA CCGGGGGCGT CAGCACCGTC GAGGCCGGCG GGCGCACGTT CCTGCAGGTC
GAGCCGGAGG CGCTGCGGCT GCTCACGGAG ACCGCGATGC ACGACATCGC GCACTACCTG
CGGCCCGGGC ACCTGCAGCA GCTGCGGAAC ATCCTGGACG ACCCCGAGGC CTCGCCGAAC
GACCGGTTCG TGGCGCTGGA CCTGCTGAAG AACGTCAACA TCTCGGCCGG CGGGATCCTG
CCGATGTGCC AGGACACCGG CACCGCGATC GTCATGGGCA AGCGCGGGCA GCAGGTCCTG
ACCGCCGGCG GCGACGAGGC GCACATCGCG CGCGGCGTCT TCGACGCCTA CACCCGGCTG
AACCTGCGCT ATTCACAGAT GGCGCCGCTG ACGATGTGGG ACGAGAAGAA CACCGGCTCG
AACCTGCCGG CGCAGGTCGA GCTGTACGCC ACGGACGGGG ACGCGTACAA GTTCCTGTTC
ATGGCCAAGG GCGGCGGCTC GGCGAACAAG TCGTACCTGT ATCAGGAGAC GAAGGCGATC
CTGAACCCCA AGGCGATGCT GAAGTTTCTC GAGGAGAAGA TCCGCTCCCT GGGGACCGCG
GCGTGCCCGC CCTACCACCT GGCGATCGTC ATCGGCGGCA CATCGGCGGA GTTCGCGCTG
AAGACCGCCA AGTACGCCTC CGCGCGCTAC CTGGACACCA TGCCGAAGCA GGGCTCGATC
ACCGCCCACG GCTTCCGCGA CCTGGAGCTG GAGGCCGAGG TCCTGGAGCT GACGCGGCGC
ATCGGCATCG GCGCCCAGTT CGGCGGCAAG TACTTCTGCC ACGACGTGCG CGTGATCCGC
CTGCCCCGGC ACGGCGCCTC GCTCCCGGTG GCGATGGCCG TCTCCTGCTC GGCCGACCGC
CAGGCCCTGG GCAAGATCAC CCGCGACGGC GTCTTCCTGG AGCAGCTGGA GTTCGAACCC
GGCCACTTCC TCCCGGAAAC CACCGACGAG CACCTGGACG ACGACGTGGT CCGCGTGGAC
CTCACCCGCC CGATGCCCGA GATCCGCTCA GAACTGTCGA AGTACCCGGT CAAGACCCGC
CTGGCCCTCA CCGGCACCCT GGTCGTCGCC CGCGACATCG CCCACGCCAA GATCAAGGAA
CGCCTCGACG CCGGCGAACC CATGCCGCAG TACATGAAGG ACCACCCGGT CTACTACGCC
GGCCCAGCCA AAACCCCCGA GGGCTACGCC TCCGGCTCCT TCGGCCCCAC CACCGCCGGC
CGCATGGACT CCTACGTAGC GCAATTCCAA GCCGCCGGCG GCTCAATGGT GATGCTCGCA
AAGGGCAACC GCTCCAAGCA GGTCACCGAC GCCTGCGCCC AACACGGCGG CTTCTACCTC
GGCTCCATCG GCGGCCCCGC AGCCCGCCTG GCACAGGACT GCATCAAGAA GGTCGAGGTG
CTCGAGTACG CCGAGCTCGG CATGGAAGCC GTATGGCGAA TCGAGGTCGA GGACTTCCCG
GCGTTCATCG TGGTCGATGA CAAGGGGAAT GACTTCTTCG CCGACACGAC CGGACCGGTG
ATGCGGATCG GGAGCAAGCC GGCGACCGCG TGA
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| Protein sequence | MPDFEYADLL PTGPDETPYR LLTTGGVSTV EAGGRTFLQV EPEALRLLTE TAMHDIAHYL
RPGHLQQLRN ILDDPEASPN DRFVALDLLK NVNISAGGIL PMCQDTGTAI VMGKRGQQVL
TAGGDEAHIA RGVFDAYTRL NLRYSQMAPL TMWDEKNTGS NLPAQVELYA TDGDAYKFLF
MAKGGGSANK SYLYQETKAI LNPKAMLKFL EEKIRSLGTA ACPPYHLAIV IGGTSAEFAL
KTAKYASARY LDTMPKQGSI TAHGFRDLEL EAEVLELTRR IGIGAQFGGK YFCHDVRVIR
LPRHGASLPV AMAVSCSADR QALGKITRDG VFLEQLEFEP GHFLPETTDE HLDDDVVRVD
LTRPMPEIRS ELSKYPVKTR LALTGTLVVA RDIAHAKIKE RLDAGEPMPQ YMKDHPVYYA
GPAKTPEGYA SGSFGPTTAG RMDSYVAQFQ AAGGSMVMLA KGNRSKQVTD ACAQHGGFYL
GSIGGPAARL AQDCIKKVEV LEYAELGMEA VWRIEVEDFP AFIVVDDKGN DFFADTTGPV
MRIGSKPATA
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