Gene Caci_0698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0698 
Symbol 
ID8332028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp817178 
End bp817741 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content70% 
IMG OID644953850 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003111474 
Protein GI256389910 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0672339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.970629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTG TTCAAGATCC CCGCGCCGCA CGAACCCGGG CCCGACTCCG TGCGGCACTG 
CTGGAGGCCT GCGCCGAGCA GCCGCTCAGT GACGTCAGCG TCGCCGAAGT AGTCCAGCGC
GCAGGTATCG GACGCGCCAC CTTCTACCTC CACTACCCGG CCCTCGAGGA ACTCGCCGTC
GACGCCTGCG CGGATGTAGT GCGCGACGCG GTCGAAGCCC TGCACGCCTG GCGCGGAATC
CCGGACCCCG CCACACCGCC GCCACCGCTG GAGGAGTTTT TCAGCAGCCT GGAGCAGCAC
CGCGCGGTCT ACACGGCACT GATGACCCCG GGCGGCGGCG GCCCACTCGG CTCGGTCCTG
CACCGCGATC TCAGGGAACG CAGTCGCAGG GAGCGCGAAC TGGCAGGCGC ACCCGAAGCA
GAACTGGTCG CGGCAGCAGT GGCCGGCACA TTCGCTGGAG TACTGGCCGA CTGGCTGCAC
GGACTGGTAC CGGGCACGGC GACAGAAGTG GCGGGGCGGG TATGGCGACT GCTGATCTCA
CTGCATCGGA CGCCGCTCGG GTGA
 
Protein sequence
MSGVQDPRAA RTRARLRAAL LEACAEQPLS DVSVAEVVQR AGIGRATFYL HYPALEELAV 
DACADVVRDA VEALHAWRGI PDPATPPPPL EEFFSSLEQH RAVYTALMTP GGGGPLGSVL
HRDLRERSRR ERELAGAPEA ELVAAAVAGT FAGVLADWLH GLVPGTATEV AGRVWRLLIS
LHRTPLG