Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0698 |
Symbol | |
ID | 8332028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 817178 |
End bp | 817741 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953850 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003111474 |
Protein GI | 256389910 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0672339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.970629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTG TTCAAGATCC CCGCGCCGCA CGAACCCGGG CCCGACTCCG TGCGGCACTG CTGGAGGCCT GCGCCGAGCA GCCGCTCAGT GACGTCAGCG TCGCCGAAGT AGTCCAGCGC GCAGGTATCG GACGCGCCAC CTTCTACCTC CACTACCCGG CCCTCGAGGA ACTCGCCGTC GACGCCTGCG CGGATGTAGT GCGCGACGCG GTCGAAGCCC TGCACGCCTG GCGCGGAATC CCGGACCCCG CCACACCGCC GCCACCGCTG GAGGAGTTTT TCAGCAGCCT GGAGCAGCAC CGCGCGGTCT ACACGGCACT GATGACCCCG GGCGGCGGCG GCCCACTCGG CTCGGTCCTG CACCGCGATC TCAGGGAACG CAGTCGCAGG GAGCGCGAAC TGGCAGGCGC ACCCGAAGCA GAACTGGTCG CGGCAGCAGT GGCCGGCACA TTCGCTGGAG TACTGGCCGA CTGGCTGCAC GGACTGGTAC CGGGCACGGC GACAGAAGTG GCGGGGCGGG TATGGCGACT GCTGATCTCA CTGCATCGGA CGCCGCTCGG GTGA
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Protein sequence | MSGVQDPRAA RTRARLRAAL LEACAEQPLS DVSVAEVVQR AGIGRATFYL HYPALEELAV DACADVVRDA VEALHAWRGI PDPATPPPPL EEFFSSLEQH RAVYTALMTP GGGGPLGSVL HRDLRERSRR ERELAGAPEA ELVAAAVAGT FAGVLADWLH GLVPGTATEV AGRVWRLLIS LHRTPLG
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