Gene Caci_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0600 
Symbol 
ID8331928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp695433 
End bp697943 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content72% 
IMG OID644953752 
Producthypothetical protein 
Protein accessionYP_003111378 
Protein GI256389814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCT CTGAGAAGGT GTCCGGGACC TTGGCTGAGC ACGCGATCGG GGATGGGACT 
GAGGGCGTTG TCGGGAACGT GATCGGGAAC GTGATCGGGA ACGTGATCGG GAACCTGACC
GTCATCGGCG TCCGGCACCA CAGCCCGGCG TGCGCGGGAC TGGTCCGCGA GGCGATCGAG
CGGCTGCGGC CGGCGCACGT GCTCATCGAG GGCCCGTCGG ACATGAACGA CCGGATCGGG
GAGTTCCTGC TCGGCCACGA GCTGCCGGTC GCGGTGTTCA CCTCGGTGCG GGTCGGCTCG
TCCGCGCGCG GCTCGTGGTC GCCGTTCTGC GCGTACTCGC CGGAATGGGT CGCGCTGACC
GAGGGCACGC GGGCCGGCGC CGAGGTGCGC TTCATCGACC TGCCGGCCTG GCATCCGGCG
TTCTCGGTGC TGACCAACCG GTACGCCGAC GCCGAGCTGC GGTTCACCGA GGTGGTGGAC
GAGCTGTGCC GGCAGTTCGG CATGGACAAC ATCGACACGC TGTGGGACCA CATCGCGGAG
ATGGAGGCCG GGCAGACCTC GGCGGCCGAG CTCGGCGAGC GGTTGAACAC GTACTTCGAC
CTGGTGCGGA CGGCTTCTGA GGCGGACCGG CAGCCGGGTG GGGGTTCTGG CACGGATTCG
GACGGCGGTC CGAGCGGCGA TCCCGGCGGT GGTCTTGGCG GTGATCCCAG CGGTGATTCA
GGCGGTGACT CGAGCGAGCT GACCTCGGAC GAGATCCGCG AGGCGTACAT GGCGCGCTGG
ATCTCGGGGG CACTGCGGCA GAGCCCTGAC AGGCCGGTCC TGGTGGTGTG CGGCGGGTTC
CACCGGCCGG CGCTGATGCG GCTCGCGGCC GAGGCGCTGT CGCGTCCCGG CGATGCCGCG
TGGCCGAAAG CCGAGCCGGC GCCTGCGGAA TCCACCGCCA GCTACCTCGT TCCCTACTCG
TTCAAGCGCC TCGACTCCTT CGACGGCTAC CAGTCCGGCA TGCCGTCGCC GGGGTACTAC
CAGCGGCTGT GGGAACTGGG ACCGAGCGGC GCGGCCGCGG CGCTGACCGA GGACGTCGTG
CTGCGGCTGC GCAAGCGCAG CCAGCGGGTC TCGACCGCCG ACCTCATCGC GGCGCGGGTC
AACGGCGAGG GCTTGGCAGC CGTGCGGGGA CACCGGTATC CGGCTCGCGC TGACCTGCTC
GACGGCCTGG TCTCGGCGCT CGTCACCGAG GCGCTGGACC AGCCGCTGCC GTGGACCGGC
CGCCGGCTGC TGGCGCCGGG GACGCATCCG GCGGTCGTGG AGATGGTCGC GGCGCTGTCC
GGCGACCAGG TCGGACGGCT GCATCCCGAC ACGCCGCTGC CGCCGCTCGT GCACGACGCC
GAGGCGGAGT TGGAGCGGCA CGGGCTGGCG GATAAGAAGT CTGCGACGCT GGACCTGACC
GTTGACAGCG AACGGGAATC CTCGCGGCTG TTGCACCGTC TCAGGGTTCT GCGCATCCCC
GGCTACGACC GGGTCTCGGG ACCGGATCCG GCGGCCGAGG ACAGCACGTT CACCGAGGAG
TGGCGGATCA CCACCGAGCG GGACCGGCTT GCCGCGCTGA TCGAGGCCGG GGGATACGGT
CCGACCGTCG AGCTGGCGGC GACGGCGCGG CTCGGGGAGC GCGTGCAGGG CGGCGGAGGC
CTGGAGGCGG CGGCGCTGGC GCTTTTCGAC GCGGTGCTGT GCGGGATCGA GGACCTGTCG
CAGGAGGTGC TGGGCTCGTT GTCGCAGTCG GTGGGCGCCG GCAACGACGT CGAGCCGCTG
GGGGAGGTGC TGGCGGCCGT GCTCGGCTTG TGGCGGCACG ACCAGCTGCT CGCGGCTCAG
GAGTCTGCGA CGCTCGGGAC GGTCATCGAC GCTTCGGTGG ACCGGCTGTT GTGGCTGGTG
GAATCGGCGC CGGGAGCTGC GGGGGCGCCT GCTCAGCCGC GCCGGATCGC GGCCGTGCGC
TCGGTGCGGG ACGCCGTCCG GCACGCGGCG GCACGGCTCG AGCTGGACAC GGTGCGTGCG
CTGGAGGTCA TGGCGCGCAT CGCGGACAAC GCGGAGGCCG CCCCGGATCT GCGCGGTGCG
GCGTTCGGCT TCGGCTGGTC GCTGGGCACG CCGCCGCCGG ATGCCGAGCG CACGATCCGT
GCCGCCGGGA GCCCGGCGAG CCTCGGGGAC TGGCTCGGCG GGCTGTTCGC GCTGGCGCGG
GAGCAGTGTC TGGAGGAGGC GTCGGTGCTG CCGGTGCTGA ACGATCTCGT TACGGCGATG
ACGGATCGGG ACTTGTTGGT GGCTCTGCCG GCACTGCGGC AGGCGTTCGG CTACTTCCCG
CCGCGCGAGC GGGAGACGAT CGCCGGGCAG GTGCTGCGGC TGCACGGGGT CGAGGACTCG
GTGCGGTCGC TGGTGCGGGC CAAGATCGAC GATCCGGTCG CCCTGGCGCG GGGACGGGAG
CTGGACAGCC ATGTGCAGGC GGTGCTGGAG CGGGAGGGGC TGATCCGGTG A
 
Protein sequence
MTSSEKVSGT LAEHAIGDGT EGVVGNVIGN VIGNVIGNLT VIGVRHHSPA CAGLVREAIE 
RLRPAHVLIE GPSDMNDRIG EFLLGHELPV AVFTSVRVGS SARGSWSPFC AYSPEWVALT
EGTRAGAEVR FIDLPAWHPA FSVLTNRYAD AELRFTEVVD ELCRQFGMDN IDTLWDHIAE
MEAGQTSAAE LGERLNTYFD LVRTASEADR QPGGGSGTDS DGGPSGDPGG GLGGDPSGDS
GGDSSELTSD EIREAYMARW ISGALRQSPD RPVLVVCGGF HRPALMRLAA EALSRPGDAA
WPKAEPAPAE STASYLVPYS FKRLDSFDGY QSGMPSPGYY QRLWELGPSG AAAALTEDVV
LRLRKRSQRV STADLIAARV NGEGLAAVRG HRYPARADLL DGLVSALVTE ALDQPLPWTG
RRLLAPGTHP AVVEMVAALS GDQVGRLHPD TPLPPLVHDA EAELERHGLA DKKSATLDLT
VDSERESSRL LHRLRVLRIP GYDRVSGPDP AAEDSTFTEE WRITTERDRL AALIEAGGYG
PTVELAATAR LGERVQGGGG LEAAALALFD AVLCGIEDLS QEVLGSLSQS VGAGNDVEPL
GEVLAAVLGL WRHDQLLAAQ ESATLGTVID ASVDRLLWLV ESAPGAAGAP AQPRRIAAVR
SVRDAVRHAA ARLELDTVRA LEVMARIADN AEAAPDLRGA AFGFGWSLGT PPPDAERTIR
AAGSPASLGD WLGGLFALAR EQCLEEASVL PVLNDLVTAM TDRDLLVALP ALRQAFGYFP
PRERETIAGQ VLRLHGVEDS VRSLVRAKID DPVALARGRE LDSHVQAVLE REGLIR