Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0600 |
Symbol | |
ID | 8331928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 695433 |
End bp | 697943 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644953752 |
Product | hypothetical protein |
Protein accession | YP_003111378 |
Protein GI | 256389814 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCT CTGAGAAGGT GTCCGGGACC TTGGCTGAGC ACGCGATCGG GGATGGGACT GAGGGCGTTG TCGGGAACGT GATCGGGAAC GTGATCGGGA ACGTGATCGG GAACCTGACC GTCATCGGCG TCCGGCACCA CAGCCCGGCG TGCGCGGGAC TGGTCCGCGA GGCGATCGAG CGGCTGCGGC CGGCGCACGT GCTCATCGAG GGCCCGTCGG ACATGAACGA CCGGATCGGG GAGTTCCTGC TCGGCCACGA GCTGCCGGTC GCGGTGTTCA CCTCGGTGCG GGTCGGCTCG TCCGCGCGCG GCTCGTGGTC GCCGTTCTGC GCGTACTCGC CGGAATGGGT CGCGCTGACC GAGGGCACGC GGGCCGGCGC CGAGGTGCGC TTCATCGACC TGCCGGCCTG GCATCCGGCG TTCTCGGTGC TGACCAACCG GTACGCCGAC GCCGAGCTGC GGTTCACCGA GGTGGTGGAC GAGCTGTGCC GGCAGTTCGG CATGGACAAC ATCGACACGC TGTGGGACCA CATCGCGGAG ATGGAGGCCG GGCAGACCTC GGCGGCCGAG CTCGGCGAGC GGTTGAACAC GTACTTCGAC CTGGTGCGGA CGGCTTCTGA GGCGGACCGG CAGCCGGGTG GGGGTTCTGG CACGGATTCG GACGGCGGTC CGAGCGGCGA TCCCGGCGGT GGTCTTGGCG GTGATCCCAG CGGTGATTCA GGCGGTGACT CGAGCGAGCT GACCTCGGAC GAGATCCGCG AGGCGTACAT GGCGCGCTGG ATCTCGGGGG CACTGCGGCA GAGCCCTGAC AGGCCGGTCC TGGTGGTGTG CGGCGGGTTC CACCGGCCGG CGCTGATGCG GCTCGCGGCC GAGGCGCTGT CGCGTCCCGG CGATGCCGCG TGGCCGAAAG CCGAGCCGGC GCCTGCGGAA TCCACCGCCA GCTACCTCGT TCCCTACTCG TTCAAGCGCC TCGACTCCTT CGACGGCTAC CAGTCCGGCA TGCCGTCGCC GGGGTACTAC CAGCGGCTGT GGGAACTGGG ACCGAGCGGC GCGGCCGCGG CGCTGACCGA GGACGTCGTG CTGCGGCTGC GCAAGCGCAG CCAGCGGGTC TCGACCGCCG ACCTCATCGC GGCGCGGGTC AACGGCGAGG GCTTGGCAGC CGTGCGGGGA CACCGGTATC CGGCTCGCGC TGACCTGCTC GACGGCCTGG TCTCGGCGCT CGTCACCGAG GCGCTGGACC AGCCGCTGCC GTGGACCGGC CGCCGGCTGC TGGCGCCGGG GACGCATCCG GCGGTCGTGG AGATGGTCGC GGCGCTGTCC GGCGACCAGG TCGGACGGCT GCATCCCGAC ACGCCGCTGC CGCCGCTCGT GCACGACGCC GAGGCGGAGT TGGAGCGGCA CGGGCTGGCG GATAAGAAGT CTGCGACGCT GGACCTGACC GTTGACAGCG AACGGGAATC CTCGCGGCTG TTGCACCGTC TCAGGGTTCT GCGCATCCCC GGCTACGACC GGGTCTCGGG ACCGGATCCG GCGGCCGAGG ACAGCACGTT CACCGAGGAG TGGCGGATCA CCACCGAGCG GGACCGGCTT GCCGCGCTGA TCGAGGCCGG GGGATACGGT CCGACCGTCG AGCTGGCGGC GACGGCGCGG CTCGGGGAGC GCGTGCAGGG CGGCGGAGGC CTGGAGGCGG CGGCGCTGGC GCTTTTCGAC GCGGTGCTGT GCGGGATCGA GGACCTGTCG CAGGAGGTGC TGGGCTCGTT GTCGCAGTCG GTGGGCGCCG GCAACGACGT CGAGCCGCTG GGGGAGGTGC TGGCGGCCGT GCTCGGCTTG TGGCGGCACG ACCAGCTGCT CGCGGCTCAG GAGTCTGCGA CGCTCGGGAC GGTCATCGAC GCTTCGGTGG ACCGGCTGTT GTGGCTGGTG GAATCGGCGC CGGGAGCTGC GGGGGCGCCT GCTCAGCCGC GCCGGATCGC GGCCGTGCGC TCGGTGCGGG ACGCCGTCCG GCACGCGGCG GCACGGCTCG AGCTGGACAC GGTGCGTGCG CTGGAGGTCA TGGCGCGCAT CGCGGACAAC GCGGAGGCCG CCCCGGATCT GCGCGGTGCG GCGTTCGGCT TCGGCTGGTC GCTGGGCACG CCGCCGCCGG ATGCCGAGCG CACGATCCGT GCCGCCGGGA GCCCGGCGAG CCTCGGGGAC TGGCTCGGCG GGCTGTTCGC GCTGGCGCGG GAGCAGTGTC TGGAGGAGGC GTCGGTGCTG CCGGTGCTGA ACGATCTCGT TACGGCGATG ACGGATCGGG ACTTGTTGGT GGCTCTGCCG GCACTGCGGC AGGCGTTCGG CTACTTCCCG CCGCGCGAGC GGGAGACGAT CGCCGGGCAG GTGCTGCGGC TGCACGGGGT CGAGGACTCG GTGCGGTCGC TGGTGCGGGC CAAGATCGAC GATCCGGTCG CCCTGGCGCG GGGACGGGAG CTGGACAGCC ATGTGCAGGC GGTGCTGGAG CGGGAGGGGC TGATCCGGTG A
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Protein sequence | MTSSEKVSGT LAEHAIGDGT EGVVGNVIGN VIGNVIGNLT VIGVRHHSPA CAGLVREAIE RLRPAHVLIE GPSDMNDRIG EFLLGHELPV AVFTSVRVGS SARGSWSPFC AYSPEWVALT EGTRAGAEVR FIDLPAWHPA FSVLTNRYAD AELRFTEVVD ELCRQFGMDN IDTLWDHIAE MEAGQTSAAE LGERLNTYFD LVRTASEADR QPGGGSGTDS DGGPSGDPGG GLGGDPSGDS GGDSSELTSD EIREAYMARW ISGALRQSPD RPVLVVCGGF HRPALMRLAA EALSRPGDAA WPKAEPAPAE STASYLVPYS FKRLDSFDGY QSGMPSPGYY QRLWELGPSG AAAALTEDVV LRLRKRSQRV STADLIAARV NGEGLAAVRG HRYPARADLL DGLVSALVTE ALDQPLPWTG RRLLAPGTHP AVVEMVAALS GDQVGRLHPD TPLPPLVHDA EAELERHGLA DKKSATLDLT VDSERESSRL LHRLRVLRIP GYDRVSGPDP AAEDSTFTEE WRITTERDRL AALIEAGGYG PTVELAATAR LGERVQGGGG LEAAALALFD AVLCGIEDLS QEVLGSLSQS VGAGNDVEPL GEVLAAVLGL WRHDQLLAAQ ESATLGTVID ASVDRLLWLV ESAPGAAGAP AQPRRIAAVR SVRDAVRHAA ARLELDTVRA LEVMARIADN AEAAPDLRGA AFGFGWSLGT PPPDAERTIR AAGSPASLGD WLGGLFALAR EQCLEEASVL PVLNDLVTAM TDRDLLVALP ALRQAFGYFP PRERETIAGQ VLRLHGVEDS VRSLVRAKID DPVALARGRE LDSHVQAVLE REGLIR
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