Gene Caci_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0593 
Symbol 
ID8331921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp679838 
End bp680362 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content72% 
IMG OID644953745 
ProductMgtC/SapB transporter 
Protein accessionYP_003111371 
Protein GI256389807 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.954255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCTGC ACCTGGAAAG CCTGAGCCAG CTGGGCCGCC TGACCCTGGC CTTCGCCCCG 
ACCTACCTGC TCGGCTTCGA ACGCGACCTG CGCGGCTCCC CGGCGGGCGA CCGCACGTTC
TCCCTGATCG GCGTCGGCAG CGCCATCATC GCCGTCCTGG CCAAGGACGG CAACGCCCCC
AACGCCCTGG CCGGCGTCAT CACCGGCGTC GGTTTCATCG GCGCCGGCGT GGTCTTCCGC
CCCAACCTGA CCCTCAACGC CCGCCGCCAC CTGCTCGACA CCGTCAAAGG CGTCACCACC
GCCGCCACCA TCTTCGCCGC CGCCGCCATC GGCGCCGCCT GCGGCTTCGG CCGCCTCATC
CTCGCCACCG GCGGCACAGC ACTGGTGCTG CTGGCGTTGG AGGTCCGGCA CATCCCGGTG
CTGAAGTTCG CCGACGGGCG GCGCTGGGCG TCGCGCTTCG CGAACGACGA GGTGATGGTT
CCTGATGCGG CGGGCAAGGA GGCGGCGGAG GAGGGCGAGG CGTGA
 
Protein sequence
MHLHLESLSQ LGRLTLAFAP TYLLGFERDL RGSPAGDRTF SLIGVGSAII AVLAKDGNAP 
NALAGVITGV GFIGAGVVFR PNLTLNARRH LLDTVKGVTT AATIFAAAAI GAACGFGRLI
LATGGTALVL LALEVRHIPV LKFADGRRWA SRFANDEVMV PDAAGKEAAE EGEA