Gene Caci_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0476 
Symbol 
ID8331803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp541555 
End bp542346 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID644953642 
Producthypothetical protein 
Protein accessionYP_003111269 
Protein GI256389705 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.59765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCC CCGATACGGT GATCGCCGCC CTGCGCAGCG AGTACGACCT TCTGGCCCAG 
CAGGTCGCGG CGTTCAGCGA CGACGACCTG GCCGGGCCCT CGGCCGCGTC CGAGTGGGAC
ATCTCGGAAG TCCTCAGCCA CTTGGGCAGC GGCGCGGAGA TCAACCGGGC GACGCTCCAA
GCCGCGCTCG ACGGGACGGC GCCCGGCGGC CGCGAGTTCA ACGAGTCTGT CTGGGACCGG
TGGAACGCCA TGTCCGGCCG GGAGCGCGCC GACGGGTTCG TCGCGGCGAA CCGCGAGCTG
ACCGAACTGT ATGAATCGCT GGATGCCGAG ACGCGGGAAA ACCTGAGGAT CGACATGGGC
TTCCTGCCCG CGCCGATCGA CGTGGCGACC GCCGGGCGCA TGCGTCTCAA TGAGCTGGCC
ATGCACTCCT GGGACATCCG TGTCGCCTCG GACGTGAACG CCACGCTTGC GCCCCAAGCC
GTCCGCGAAC TCCTGCACGG CGAGCCGGAC CTCACCGCAT GGACCAGCAA GCCCGAGCAC
CTCGACGGCG AGAGCCTGGT CCTCCACGTC ACCACGAGCG AGCCGGAGTC GGACTTCGCC
CTGAACCTGA CCACCCCGGT GAGCACCAGC TTCGAGGTCG CCGACAAGTA CGACGGCACG
CTCACGCTCC CGGCCGAGGC CTGGCTGCGT CTCAAAGTCG GACGTCTCGC GCCGCAGCAC
ACGCCGACCG GGATCGTCAC CACCGGCGCC GCCGACCTCG ACCTGCTGCG CAAGGTCTTC
CCCGGGTACT AG
 
Protein sequence
MSSPDTVIAA LRSEYDLLAQ QVAAFSDDDL AGPSAASEWD ISEVLSHLGS GAEINRATLQ 
AALDGTAPGG REFNESVWDR WNAMSGRERA DGFVAANREL TELYESLDAE TRENLRIDMG
FLPAPIDVAT AGRMRLNELA MHSWDIRVAS DVNATLAPQA VRELLHGEPD LTAWTSKPEH
LDGESLVLHV TTSEPESDFA LNLTTPVSTS FEVADKYDGT LTLPAEAWLR LKVGRLAPQH
TPTGIVTTGA ADLDLLRKVF PGY