Gene Caci_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0447 
Symbol 
ID8331774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp503955 
End bp505037 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content68% 
IMG OID644953613 
Productmonosaccharide ABC transporter substrate-binding protein, CUT2 family 
Protein accessionYP_003111240 
Protein GI256389676 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4213] ABC-type xylose transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACACT CGATCATCCG CTCCCTGGCA GTCGGCGCCG TCGCGGCGCT CGCGCTCGGA 
GCGTGCAGCT CCGGCACCGG CGGATCAGCC AAGGGGCGCA AGCCGTACAT CGGCGTGATC
CTGCCCGACA CCACGTCCTC CGCCCGCTGG GCGACGCAGG ACCAGCCGGC TCTGGCCGCG
GCGTTCAAAG CCAAGAACGT CAAGTACGAC ATCCAGAACG CGCAGGGCAA CAAGACCCAG
TTCCAGGCGA TCGCCGACCA CATGCTCAAG GAGGGCGTCA ACATCCTGAT GATCGTCGAC
CTGGACGCCG CCACGGGCAC CGCGGTGCTG GCCAAGGCGC GGCAGCAGGG CGTGCCGACC
ATCGACTACG ACCGCCTCAC CCTGGGCGGC GGCGCGGACT ACTACGTCAG CTTCGACAAC
GTGGACGTCG GCGAGCTCCA GGGGCAGGGT CTGGTGGCGT GCCTGGGCGG CACCAAGAAG
CCGGTCGTGG CCGAGGTGAA CGGCTCCCCC ACGGACAACA ACGCGACGCT GTTCGCACAG
GGCTACAACT CCGTGCTCAA CCCGCTCTAC GCCGACGGCA CGTTCATCAA GGGCCCGAAC
CAGTCCACCA CCGACTGGAA GAACGACATC GCCGGCCAGA ACTTCGCGAA GATGCTCGCC
GAGGCGCCGA ACATCGGCGG CGTGCTGGTG GCCAACGACG GCATGGCCCA GGCGGTGATC
GGCGTCCTGA AGCAGCACCA CCTCAACGGC AGGGTCCAGG TCACCGGTCA GGACGCGACC
GTCGCCGGGC TGCAGTCGGT GCTGGTCGGC GACCAGTGCA TGACCATCTT CAAGGACTCG
GTGAAGGAGG CGAACGCCGC CGCCGAGCTG GCGACCGCCC TGGCCACCGG CGGTTCGGCG
AGTTCGGCCA ACACGATGGT CGCCGACAGC GTCACCGGCA AGCTCGTCGC GTCCGTGATG
CTGACGCCGG AGGCCATCGT CAAGCAGAAC GTGGGCGACG TCATCTCCGC CGGCGCGGTC
ACGAAGGCCC AGGTGTGCAC CCCGGAATTC GCCGAGGCCT GCACGGCGAA CGGCATCAAG
TAG
 
Protein sequence
MRHSIIRSLA VGAVAALALG ACSSGTGGSA KGRKPYIGVI LPDTTSSARW ATQDQPALAA 
AFKAKNVKYD IQNAQGNKTQ FQAIADHMLK EGVNILMIVD LDAATGTAVL AKARQQGVPT
IDYDRLTLGG GADYYVSFDN VDVGELQGQG LVACLGGTKK PVVAEVNGSP TDNNATLFAQ
GYNSVLNPLY ADGTFIKGPN QSTTDWKNDI AGQNFAKMLA EAPNIGGVLV ANDGMAQAVI
GVLKQHHLNG RVQVTGQDAT VAGLQSVLVG DQCMTIFKDS VKEANAAAEL ATALATGGSA
SSANTMVADS VTGKLVASVM LTPEAIVKQN VGDVISAGAV TKAQVCTPEF AEACTANGIK