Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0447 |
Symbol | |
ID | 8331774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 503955 |
End bp | 505037 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644953613 |
Product | monosaccharide ABC transporter substrate-binding protein, CUT2 family |
Protein accession | YP_003111240 |
Protein GI | 256389676 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACACT CGATCATCCG CTCCCTGGCA GTCGGCGCCG TCGCGGCGCT CGCGCTCGGA GCGTGCAGCT CCGGCACCGG CGGATCAGCC AAGGGGCGCA AGCCGTACAT CGGCGTGATC CTGCCCGACA CCACGTCCTC CGCCCGCTGG GCGACGCAGG ACCAGCCGGC TCTGGCCGCG GCGTTCAAAG CCAAGAACGT CAAGTACGAC ATCCAGAACG CGCAGGGCAA CAAGACCCAG TTCCAGGCGA TCGCCGACCA CATGCTCAAG GAGGGCGTCA ACATCCTGAT GATCGTCGAC CTGGACGCCG CCACGGGCAC CGCGGTGCTG GCCAAGGCGC GGCAGCAGGG CGTGCCGACC ATCGACTACG ACCGCCTCAC CCTGGGCGGC GGCGCGGACT ACTACGTCAG CTTCGACAAC GTGGACGTCG GCGAGCTCCA GGGGCAGGGT CTGGTGGCGT GCCTGGGCGG CACCAAGAAG CCGGTCGTGG CCGAGGTGAA CGGCTCCCCC ACGGACAACA ACGCGACGCT GTTCGCACAG GGCTACAACT CCGTGCTCAA CCCGCTCTAC GCCGACGGCA CGTTCATCAA GGGCCCGAAC CAGTCCACCA CCGACTGGAA GAACGACATC GCCGGCCAGA ACTTCGCGAA GATGCTCGCC GAGGCGCCGA ACATCGGCGG CGTGCTGGTG GCCAACGACG GCATGGCCCA GGCGGTGATC GGCGTCCTGA AGCAGCACCA CCTCAACGGC AGGGTCCAGG TCACCGGTCA GGACGCGACC GTCGCCGGGC TGCAGTCGGT GCTGGTCGGC GACCAGTGCA TGACCATCTT CAAGGACTCG GTGAAGGAGG CGAACGCCGC CGCCGAGCTG GCGACCGCCC TGGCCACCGG CGGTTCGGCG AGTTCGGCCA ACACGATGGT CGCCGACAGC GTCACCGGCA AGCTCGTCGC GTCCGTGATG CTGACGCCGG AGGCCATCGT CAAGCAGAAC GTGGGCGACG TCATCTCCGC CGGCGCGGTC ACGAAGGCCC AGGTGTGCAC CCCGGAATTC GCCGAGGCCT GCACGGCGAA CGGCATCAAG TAG
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Protein sequence | MRHSIIRSLA VGAVAALALG ACSSGTGGSA KGRKPYIGVI LPDTTSSARW ATQDQPALAA AFKAKNVKYD IQNAQGNKTQ FQAIADHMLK EGVNILMIVD LDAATGTAVL AKARQQGVPT IDYDRLTLGG GADYYVSFDN VDVGELQGQG LVACLGGTKK PVVAEVNGSP TDNNATLFAQ GYNSVLNPLY ADGTFIKGPN QSTTDWKNDI AGQNFAKMLA EAPNIGGVLV ANDGMAQAVI GVLKQHHLNG RVQVTGQDAT VAGLQSVLVG DQCMTIFKDS VKEANAAAEL ATALATGGSA SSANTMVADS VTGKLVASVM LTPEAIVKQN VGDVISAGAV TKAQVCTPEF AEACTANGIK
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