Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0429 |
Symbol | |
ID | 8331756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 478313 |
End bp | 478825 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644953595 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003111222 |
Protein GI | 256389658 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.778555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCCGGT CCAAGGATTC CGGAGAGAAG AGTCGGGCGG CGTCCGACTT GTTCACCGAT CTCTATCCCG GCCTCGCGGG CTGGTGCCGC CGTCTCGTCG ACGACGACGG CACCGCCCAC GAGATCGCCT CCGAGGCGTT CACGCGCCTG TGGGGGCACT GGACCTCGGT GCGGGAACCG CGGGGCTTCC TGTACGTGAC GGCCGCGAAC CTGGTCCGCG ACCACTGGCG CAAGATGGAC CGCGAACGCC GGGCGATCCG GCAGGTGAGC GCGGAGGTCG AGCGCGCCGC GCACCACGAC GGCGCCGACG CGTCCGTCTC GGTGCGGATG CTGGTGCGGT CGCTCCCGGA GCGGCTGCGG ACGCCTGTTC TGCTGTACTA CTACGCCGAT CTTCCGATCC GCGAGATCGC CCAGCTGACC AGGCGCAAAG AAGGAACCGT CAAATCCGAT CTACACGCGG CACGGGAACT CCTGCGCGCC GGACTCGGAG GACATCTTGA TCACGCTCAT TGA
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Protein sequence | MSRSKDSGEK SRAASDLFTD LYPGLAGWCR RLVDDDGTAH EIASEAFTRL WGHWTSVREP RGFLYVTAAN LVRDHWRKMD RERRAIRQVS AEVERAAHHD GADASVSVRM LVRSLPERLR TPVLLYYYAD LPIREIAQLT RRKEGTVKSD LHAARELLRA GLGGHLDHAH
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