Gene Caci_0384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0384 
Symbol 
ID8331711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp426686 
End bp427390 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID644953551 
Productsuccinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 
Protein accessionYP_003111178 
Protein GI256389614 
COG category 
COG ID 
TIGRFAM ID[TIGR02046] succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.556008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.820054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACCG CTACGTGGAC GGACCGGCGT CCGCCTTCCC TGCGCACGGC TTGGGACAGC 
TCCGTCGGCA AGAAAACCGT CATGGCGGTC AGCGGCCTGG TCATGGTGCT CTACCTGCTG
GCCCACGCGT TCGGGAACCT GAAAGTCTTC TTCGGCCCGG GGCAGTTCGA CAGCTACGCG
CACTGGCTGC GGACCATGGG CGAGCCCGTC ATGCACTACA GCTGGACGCT GTGGGTCATC
CGGGTCGTGA TGGTCCTCGC CGTGGTCGCG CACACGGTCT CCGCCTACCA GCTCAGCCGC
CGCGACATCC GGGCGCGTCC GGTGCGGTAC GAGCACCGCA AGGCCGGGAG CAGCTACGCG
ACGCGGACGA TGCGCTGGGG CGGGATCATC CTCGGGCTGT TCATCATCTG GCATCTGCTC
GACCTGACGA CCGGCACCGT GCACTCCGGA TTCCAGCCGG GCCATCCCTA CGCGAACGTC
GTCTCGACCT TCAACCACTG GTACGGCGAC GTCATCTACA TCGTGGCCGT GTGCGCGCTG
GGCCTGCACA TCCAGCACGG CTTCTGGTCC GCCGCGCAGA CGCTCGGCGT GGGCAGTGCG
AAGCGCGACC GCCTGATCAA GACCACCGGC AACGTGGTCG CCGTGCTGCT CACGCTCGCC
TTCGTGGCGG TGCCGGTGGG CGTGATGAGC GGAGTGGTGA AGTGA
 
Protein sequence
MVTATWTDRR PPSLRTAWDS SVGKKTVMAV SGLVMVLYLL AHAFGNLKVF FGPGQFDSYA 
HWLRTMGEPV MHYSWTLWVI RVVMVLAVVA HTVSAYQLSR RDIRARPVRY EHRKAGSSYA
TRTMRWGGII LGLFIIWHLL DLTTGTVHSG FQPGHPYANV VSTFNHWYGD VIYIVAVCAL
GLHIQHGFWS AAQTLGVGSA KRDRLIKTTG NVVAVLLTLA FVAVPVGVMS GVVK