Gene Caci_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0335 
Symbol 
ID8331662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp374568 
End bp374804 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content62% 
IMG OID644953502 
Productribosomal protein S18 
Protein accessionYP_003111129 
Protein GI256389565 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0238] Ribosomal protein S18 
TIGRFAM ID[TIGR00165] ribosomal protein S18 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.793411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGG CACCTCTCCG CAAGCCCAAG AAGAAGGTTT GCGGATTCTG CAAGGACAAG 
GTCGCGTACG TCGACTACAA GGACACCACG CTGCTCCGGA AGTTCATCTC GGACCGCGGG
AAGATCCGTG CTCGTCGCGT GACCGGCAAC TGCACCCAGC ACCAGCGCGA CGTCGCCGTG
GCCGTGAAGA ACAGCCGTGA GATGGCGCTG CTGCCCTACA CCAGCACCAC CCGCTAG
 
Protein sequence
MPKAPLRKPK KKVCGFCKDK VAYVDYKDTT LLRKFISDRG KIRARRVTGN CTQHQRDVAV 
AVKNSREMAL LPYTSTTR