Gene Caci_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0317 
Symbol 
ID8331644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp356752 
End bp357615 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID644953484 
ProductLuciferase-like monooxygenase 
Protein accessionYP_003111111 
Protein GI256389547 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03621] probable F420-dependent oxidoreductase, MSMEG_2516 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCCC GCACCTTCCG CTTCGCCGTC GTCGCGGCCC TCGCCCCGAC CGCCCAGGCC 
TGGCAGGAGC TGGCCCGGCG GGCTGAGGAA CTCGGCTACG ACACGCTGCT GGCCCCGGAC
ACCATGACCA CCCTGGAGCC GTTCACGGCC CTGGCCGCCG CCGCGACCGC CACCGAGCGG
CTGCGCGTGG GCACCTTCGT CCTGCCGGCG CCGTTCTACC CGCCCTCGGA GATCGCCTGG
CGCGCGCTGG CGCTGGACCT GCTCTCCGGC GGACGCTTCG ACCTGGGCCT GGGCGCCGGC
CGCCCCGGAG CCGAGGACGA GGTCGTGCAC CGCGAGCGGC GCTTCGGCAC GCCGGCCGAG
CGCGTGAAAC AGCTCTCTGA CGCCCTGCAC ATCGTCAAGG AGGAGCTCGC CGCCGCGGCG
GCCGGCCGCT CCCCGCTCAA GCCGGTCCAG AAGCCGCACC CGCCGATCCT GGTCGCTGCC
GCCGGACCCA AGATGTTCCA GCTCGCCGCC GCCGAAGCCG ACATCCTGAC CCTCGGGCTG
GACCCGCGCA CCACCGAGGA CGGCCTCGCG GCGAAGATCG CCGAGCTGCG CGCCATCGCG
GGCTCCCGCG TCGACGACCT CGAACTCAGC TACAACCTGG CCGGTGTCGG CACCGAGCTG
CCGGGCTTCC TGAGCCAGCA GATGGGCGTC GATCCCGCCG AACTCATCCG CACCGGCGCT
CCGGCCGTCC TCACCGGCAC GCCGCAGGAG ATGGCCGACA AGCTGCGCCG CCGCCGCGAC
ACCCTCGGGA TCTCCTACAT CGCCGTGAAC GGAATGTTCT TGGAGCAGCT GGCGCCGGTG
GTCGAGATGC TGGCTGGAAA ATGA
 
Protein sequence
MHPRTFRFAV VAALAPTAQA WQELARRAEE LGYDTLLAPD TMTTLEPFTA LAAAATATER 
LRVGTFVLPA PFYPPSEIAW RALALDLLSG GRFDLGLGAG RPGAEDEVVH RERRFGTPAE
RVKQLSDALH IVKEELAAAA AGRSPLKPVQ KPHPPILVAA AGPKMFQLAA AEADILTLGL
DPRTTEDGLA AKIAELRAIA GSRVDDLELS YNLAGVGTEL PGFLSQQMGV DPAELIRTGA
PAVLTGTPQE MADKLRRRRD TLGISYIAVN GMFLEQLAPV VEMLAGK