Gene Caci_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0313 
Symbol 
ID8331640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp353306 
End bp353719 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content68% 
IMG OID644953480 
ProductMov34/MPN/PAD-1 family protein 
Protein accessionYP_003111107 
Protein GI256389543 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCG TCTCGCAGGA GATCTACGAC GCGATCGTCG CGCACGCCCG CCGGGACCAC 
CCCGACGAGG CCTGCGGGAT CGTCGCCGGG CCGGAGGGCT CCGACCGCCC CGAGCGCTTC
GTGCCGATGG CCAACGCCGA GCGCTCGCCG ACGTTCTACC GGCTGGACCC GGCCGAGCAG
TTCAAGGTGT GGCGGGAGAT GGACGACCGC GACGAGGAGC CGGTGATCGT CTACCACTCG
CACACCTCGA CCGAGGCTCG TCCCTCGCGG ACCGACATCA GTTATGCCTC TGAACCCAAT
GCGCATTACG TGCTGGTGTC CACGCGCGAC ACCGACAAAC TCGGCGACTT CCAGTTCCGC
TCGTTCCGGA TCGTCGACGG CGAGGTGACC GAGGAGCCGG TGACGGTCCT CTGA
 
Protein sequence
MLTVSQEIYD AIVAHARRDH PDEACGIVAG PEGSDRPERF VPMANAERSP TFYRLDPAEQ 
FKVWREMDDR DEEPVIVYHS HTSTEARPSR TDISYASEPN AHYVLVSTRD TDKLGDFQFR
SFRIVDGEVT EEPVTVL