| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0310 |
|---|
| Symbol | |
|---|
| ID | 8331637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 350452 |
|---|
| End bp | 351315 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644953477 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003111104 |
|---|
| Protein GI | 256389540 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.76271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCG CGCTGCTGAG GACGTTCCTC GCCGTCCACC GCGCCGGCTC GCTCACCCGG
GCCGCCGCGG ATCTCGGCGT GTCCCAGCCC GCGGTGACCG CGCAGGTCAG GACGCTGGAG
CAACGCGTCG GCCGCGAGCT GTTCGTCCGG CTGCCGCGCG GCGTCGCGCC CACGGCGGCC
GCCGACGAGC TGGCCCGGGC GATCGCGCCG CATCTGGACG CGCTCGCCGC GGTCGCGCAC
GAGACGCTGG TCCCGGATTC CGGGCCGCTC GCCGCGGTAC GCCTCGGCTG TCCGGCTAGT
CTGACCACGA CGCTACTGCT TCCGGCCCTC GCTCCCTTGG TGGACGAGGG CCTTCGCGTG
GTCGTGGCCG GCGGGCGCAG CGACGACCTG GTCGCGCAGC TGGCGACCGG CCGCCTGGAC
CTGACGCTCG CGGTCACCAG ACCGAGGCTG CCCGGAGTGA CGGTGATCCC GCTCGCCGAC
GAGGAGTACG CGCTGGTCGG GGCGCCGCGC TGGAAGCCCT TCGACCGCAC GGGCCGCACG
CCGCTGCTCG ACCTCTCGGA GAATCTTCCT TATATAAGTC TCTACTGGTC GTCCGTATAC
GACACCCGAC CCACATCCGA CGCCGCGCTG GTCATCCCCG ACCTGCGCGG CGTTCTCGAT
GCGGCGGTCG CCGGCTGCGG CGCGGCGGTC CTGCCCCTGC CGCTGTGCGC CCCGGCGCTC
GACGACTGGA CACTGGTCCT GCTCGACGAG CCCGAGATTC CGCCGATCCG GACGCTGTTC
GTCGCGGTGC GCGGGCAGCG GGCCCGGTCG GCGGCGGTGG CGCGGGTCCG GGACCGGCTG
GTCGCTGTCG CCTCGCGCTG GTAG
|
|---|
| Protein sequence | MDLALLRTFL AVHRAGSLTR AAADLGVSQP AVTAQVRTLE QRVGRELFVR LPRGVAPTAA
ADELARAIAP HLDALAAVAH ETLVPDSGPL AAVRLGCPAS LTTTLLLPAL APLVDEGLRV
VVAGGRSDDL VAQLATGRLD LTLAVTRPRL PGVTVIPLAD EEYALVGAPR WKPFDRTGRT
PLLDLSENLP YISLYWSSVY DTRPTSDAAL VIPDLRGVLD AAVAGCGAAV LPLPLCAPAL
DDWTLVLLDE PEIPPIRTLF VAVRGQRARS AAVARVRDRL VAVASRW
|
|---|
| |