Gene Caci_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0303 
Symbol 
ID8331630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp341687 
End bp342703 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content73% 
IMG OID644953470 
Productcytochrome bd ubiquinol oxidase subunit II 
Protein accessionYP_003111097 
Protein GI256389533 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG TCGACCTCCT CCTGGGCGTG ATCGTCTGCG CCCTGGCCGC CTACGCCCTG 
CTCGCCGGCG CCGACTTCGG CGCCGGGGTC TGGGATCTGC TGGCTCGCGG CCGCCACGCC
GACCGCGAGC GCCGCCTCAT CGCCCATGCG CTCGGCCCGG TCTGGGAGGC GAACCACGTC
TGGCTGATCT TCGTGATCGT CGCGACCTTC AGCGGCTTCC CGACCGCCTT CGGCATCATC
GCGCGCGGCT TGGAACTGCC GCTGGCCTTG GCGCTGGCCG GCATCGTGCT GCGCGGGGCG
GCGTACGTCT ACCGCGCCTA CGGCGAGGGC GCCGCCGGGC CCGACAGCCT GTGGAGCCGG
GTCTTCGCGG TGGCCTCCTC GATCACCCCG TTCATGCTCG GCGTCAGCGG CGCGGCGCTG
GCGACCGGCA AGATCACCGC CACCTCCGGT CCGCTGACCC CGTTCGACTC CCCCTTCACG
CTGGTGGCCG GCGTCTTCGC GGTCGTGGTG ACCGCGTTCC TGGCCGCCGT CTACCTCTGC
CACGACGCCG GCACTGACCC GGAGACCGAG GACCTGGTCC CGGCCTTCCG GCGCAGGGCG
CTCGGCGCGG CGGCGGTGGC CGGGGTCGTC AGCATGGCCC TGCTGCCGCT GCTGTATCAG
GACGCGCCGA TCGTCGCGCA CCGCTTCACC GAGCGCTCGA TCCCCTTCGT GGCCGTCGCA
GTGGTCTGCG GATTCGGCTC CCTCGCGGTG ATCTGGAAGC GGCACTACGT CCTGGCCCGC
GCGACGGCCG CCACGGCGGT GATCGGCGTG CTGCTCGGCT GGGCCGCGGC TCAGTACCCG
GATCTGGCGG TCGGGGCGGC GACGGCCCGC GGCTCGGCGG CCGGACCGGC GAACCTGCAC
GCCCTGCTGA TCGCGATGGG CTTCGGGATG GTGGTCATCC TGCCCGCGTT TTACCTGCTG
TTGAAGGTCT TCTCAGGGCC CGAAGGCGCG GCCGGCGGTA GTGGGCTCGC AAACTGA
 
Protein sequence
MTAVDLLLGV IVCALAAYAL LAGADFGAGV WDLLARGRHA DRERRLIAHA LGPVWEANHV 
WLIFVIVATF SGFPTAFGII ARGLELPLAL ALAGIVLRGA AYVYRAYGEG AAGPDSLWSR
VFAVASSITP FMLGVSGAAL ATGKITATSG PLTPFDSPFT LVAGVFAVVV TAFLAAVYLC
HDAGTDPETE DLVPAFRRRA LGAAAVAGVV SMALLPLLYQ DAPIVAHRFT ERSIPFVAVA
VVCGFGSLAV IWKRHYVLAR ATAATAVIGV LLGWAAAQYP DLAVGAATAR GSAAGPANLH
ALLIAMGFGM VVILPAFYLL LKVFSGPEGA AGGSGLAN