| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0277 |
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| Symbol | |
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| ID | 8331604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 312760 |
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| End bp | 314544 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644953444 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003111071 |
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| Protein GI | 256389507 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.491572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCC CCGCCCCTAT CCGGGGGACT AACCACCCTC GAGTCGAGAA TAAGGAACCG
TCAACCGCCG AAGGAAGGCC CACCGGCCGC ATTCCACTCG CACGGAGCAG CGACACGCCG
GAAACGCGCC ACGACACGCC GACGGGCTCC GGAAGCGACA CGCCGGGCTC GGGCAGCAGC
ACACCAGCGG GTTCCCGCAG CGACACGCCG GGCCCGGACA CCAGCACGCT CGCGGCCTCC
CGCAACGACA CCCCGGGCTC GGGCAACAGC ACGCTGCCAG GCTCCCGCGG CGACACGCCG
AGCTCGGACA CCAGCACGCT CGCAGCCTCC CGCGGCGACA CCCCGGACTC GGACAACAGC
ACGCTCGCGG CCTCCCGCAG CGACACCCCG GACTCGGCCA ACAACACGCC GGCGACCTCC
CGCAGCGCCA CCCCAGCCTT CAACCATCGC CTCACCGTCC CGCTTCTGCT CGGGGCGACG
CTGAATCCGA TCAACTCCTC GATGATCGCG ATCGCGTTGG TGCCGATCGG GGCGGCGTTC
GGTGCCTCGC CTGCGGCGAC TGCGTGGCTG GTCTCCGCGC TCTATCTGGC GACGGCTATT
GGGCAGCCGG TGATCGGGCG GCTTGTGGAC CGGTTTGGGG CGCGTCCGCT GTTCCTCACC
GGAGCGGCTT TGGTGGGCGT GGCGGGGGTG ATCGGGGCGG TGGCGCCGTC GCTCGGGGTG
CTGATTATGG CGCGCGTGTT GTTGGGGTTC GGGACGAGCG CGCAGTTCCC TGCGGCTATG
CACACTGTGC GGGGCGAGGC GCAGCGCACA GGGCTGAAGA CGCCTAGCGG AATCCTTACT
GCGCTCTCCA TATCTGCGCA GAGCACGATG GTCATCGGGC CGACGCTTGG TGGCGCGCTC
ATTGGGGTCG GCGGGTGGCG CCTGGTGTTC GCCGTCAACA TCCCCTTGGC GTTGGTCTGT
ATAGCGCTCG GTGCGCGCAG ACTCCCTAAG AGCGCGCCTG TACAGAACGA GAGCCGCATC
GATCTGGTCG GCATGGGGCT CTTCGCGGCG ATGCTGACCA GCCTGCTGGT GTTCCTCATG
GACCTCAGCG TCGGCAATCT GTATCTGCTG GTGATCGCCG CTGCGATGGC TGGAGCGTTC
GTCCGTATAG AGCTTCGCTC TGGGGAGCCC TTTATAGACA TGCGTGTCTT CGGCGGGAAC
ACCCCGCTGC TGATCACCTA TCTACGGCAG ACGCTCACGT ACGTTCTCAC CTACTCCTTC
ATCTACGGAT TCACGCAGTG GCTGGAGGAG GGACGCGGAC TCAGCGCGTC CGCAGCTGGG
CTCGTCGTCC TGCCGACGTC GCTCACCGCG ATCGTTGTCG CCTGGTTCAC GGGGCGGCGC
AATGGCATCC GCAGCAAGCT CTTCGCGGGG ACCCTGTCGA TGATCGCGGC GTCCGCGGCA
TTGCTGGCGC TTAACCGGGA GAGCGCTATA TGGATCCTCA TAGGCGTGGG TCTCCTAGCG
GGTGCGACGC AGGGGATGAA CGGCCTCGCC AACCAGAACG CCTTGTTCCG TCAGGCAGAT
GCGGCGCGTA TGGGAACCGC GTCAGGGCTT CTGCGGACCT TCCAGTACCT GGGCGCGATC
CTGTCCTCAG CTGCCGTGGC GATCGTCTTC CGTACCGGGG CTTCCACGGT CGGCCTTCAC
GAGCTGGCCG TCGTTATGAT CGCTTGCGGC GCGCTGCTGC TCGCCGTGGT CCTCGCCGAC
CGCTCGCTGT CCCTCCGCAC CGAGAACCGC GGACAGAGCC GATAA
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| Protein sequence | MTAPAPIRGT NHPRVENKEP STAEGRPTGR IPLARSSDTP ETRHDTPTGS GSDTPGSGSS
TPAGSRSDTP GPDTSTLAAS RNDTPGSGNS TLPGSRGDTP SSDTSTLAAS RGDTPDSDNS
TLAASRSDTP DSANNTPATS RSATPAFNHR LTVPLLLGAT LNPINSSMIA IALVPIGAAF
GASPAATAWL VSALYLATAI GQPVIGRLVD RFGARPLFLT GAALVGVAGV IGAVAPSLGV
LIMARVLLGF GTSAQFPAAM HTVRGEAQRT GLKTPSGILT ALSISAQSTM VIGPTLGGAL
IGVGGWRLVF AVNIPLALVC IALGARRLPK SAPVQNESRI DLVGMGLFAA MLTSLLVFLM
DLSVGNLYLL VIAAAMAGAF VRIELRSGEP FIDMRVFGGN TPLLITYLRQ TLTYVLTYSF
IYGFTQWLEE GRGLSASAAG LVVLPTSLTA IVVAWFTGRR NGIRSKLFAG TLSMIAASAA
LLALNRESAI WILIGVGLLA GATQGMNGLA NQNALFRQAD AARMGTASGL LRTFQYLGAI
LSSAAVAIVF RTGASTVGLH ELAVVMIACG ALLLAVVLAD RSLSLRTENR GQSR
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