Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0224 |
Symbol | |
ID | 8331550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 246125 |
End bp | 246994 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644953390 |
Product | hypothetical protein |
Protein accession | YP_003111018 |
Protein GI | 256389454 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGGGC ACCGACGTTC GCCAGCCCAT GATGCCACCC AGAGAGATCA ACTGCACACC CATAGTGGCC ATCTGGCGCG GATCGGGCGC GACATCAGAG ACGGGCGGGG ACTGGAGGGC TATGCGGTCT TCGTCACGGG ACTGACGATG ACCGTGCTCG GCCTCACCGA CGCGGTCAGC GCTCCCATCA TGGGCGCCGC GCAGCTGCTC GCAATCTCGT TCCTGGTCTT CCACAGCATC ACGCCGAACC GGCACCGGGC GGTGGACGTC CTGGCCGGCC GGGAGGCCTT CGCGCCGTTC CCATCACTGC TCCCTCATGC CCGGGATCTG CGGATCTATG GCCCGACTGC GATCAACGTC GTCGTGCATC TGGCAGAGAT CCGGCGGCTG GTGCTGGCCC GCGGCGGCAT GGTGCGGATC GTGGTGCAGA AGCCGGATCC GATCCAGCTG CGACACACCG CGGTACAACT GGACCAAGGC CTTGATCTTG ACCAAACGCT GACCGCCGCG ATCCGCAGCC TGGAACGCTG CGACGGCCTC CCCGGGTTCG GCTACCGCCT GCTGCCCTTC AACCCCGGGT TCAGCCTGGT CGTCGTCAAC GCCGGCGACA AGGACGGGTA CGTCATCGTC GAGCCGCATG GCTTCGGCGA CCAGGCCATC AGCGACCGGA TGCACCTGCG CATCACCCGG AGCGAATCGC CGCGATGGTT CGCCTACTGG GTCGATCGGT TCGACGCGAT CTGGGCGGCG TCCTCGGACG GGGAGCACGC GAGTTCCGGC GCTAAGCCGG GCACCGACGG TGAAACCCGC TCCGAAGGGC GTCTTGGATC CCTCTCGCAG CCCGACGCCG AACAGGGCGT GGCCGGATGA
|
Protein sequence | MTGHRRSPAH DATQRDQLHT HSGHLARIGR DIRDGRGLEG YAVFVTGLTM TVLGLTDAVS APIMGAAQLL AISFLVFHSI TPNRHRAVDV LAGREAFAPF PSLLPHARDL RIYGPTAINV VVHLAEIRRL VLARGGMVRI VVQKPDPIQL RHTAVQLDQG LDLDQTLTAA IRSLERCDGL PGFGYRLLPF NPGFSLVVVN AGDKDGYVIV EPHGFGDQAI SDRMHLRITR SESPRWFAYW VDRFDAIWAA SSDGEHASSG AKPGTDGETR SEGRLGSLSQ PDAEQGVAG
|
| |