Gene Caci_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0224 
Symbol 
ID8331550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp246125 
End bp246994 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content68% 
IMG OID644953390 
Producthypothetical protein 
Protein accessionYP_003111018 
Protein GI256389454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGGC ACCGACGTTC GCCAGCCCAT GATGCCACCC AGAGAGATCA ACTGCACACC 
CATAGTGGCC ATCTGGCGCG GATCGGGCGC GACATCAGAG ACGGGCGGGG ACTGGAGGGC
TATGCGGTCT TCGTCACGGG ACTGACGATG ACCGTGCTCG GCCTCACCGA CGCGGTCAGC
GCTCCCATCA TGGGCGCCGC GCAGCTGCTC GCAATCTCGT TCCTGGTCTT CCACAGCATC
ACGCCGAACC GGCACCGGGC GGTGGACGTC CTGGCCGGCC GGGAGGCCTT CGCGCCGTTC
CCATCACTGC TCCCTCATGC CCGGGATCTG CGGATCTATG GCCCGACTGC GATCAACGTC
GTCGTGCATC TGGCAGAGAT CCGGCGGCTG GTGCTGGCCC GCGGCGGCAT GGTGCGGATC
GTGGTGCAGA AGCCGGATCC GATCCAGCTG CGACACACCG CGGTACAACT GGACCAAGGC
CTTGATCTTG ACCAAACGCT GACCGCCGCG ATCCGCAGCC TGGAACGCTG CGACGGCCTC
CCCGGGTTCG GCTACCGCCT GCTGCCCTTC AACCCCGGGT TCAGCCTGGT CGTCGTCAAC
GCCGGCGACA AGGACGGGTA CGTCATCGTC GAGCCGCATG GCTTCGGCGA CCAGGCCATC
AGCGACCGGA TGCACCTGCG CATCACCCGG AGCGAATCGC CGCGATGGTT CGCCTACTGG
GTCGATCGGT TCGACGCGAT CTGGGCGGCG TCCTCGGACG GGGAGCACGC GAGTTCCGGC
GCTAAGCCGG GCACCGACGG TGAAACCCGC TCCGAAGGGC GTCTTGGATC CCTCTCGCAG
CCCGACGCCG AACAGGGCGT GGCCGGATGA
 
Protein sequence
MTGHRRSPAH DATQRDQLHT HSGHLARIGR DIRDGRGLEG YAVFVTGLTM TVLGLTDAVS 
APIMGAAQLL AISFLVFHSI TPNRHRAVDV LAGREAFAPF PSLLPHARDL RIYGPTAINV
VVHLAEIRRL VLARGGMVRI VVQKPDPIQL RHTAVQLDQG LDLDQTLTAA IRSLERCDGL
PGFGYRLLPF NPGFSLVVVN AGDKDGYVIV EPHGFGDQAI SDRMHLRITR SESPRWFAYW
VDRFDAIWAA SSDGEHASSG AKPGTDGETR SEGRLGSLSQ PDAEQGVAG