Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0134 |
Symbol | |
ID | 8331459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 139484 |
End bp | 140566 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953301 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003110930 |
Protein GI | 256389366 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGAGAC GACCTGAAGC CGACCGCGAC TCGACCACCC CCCGCGCGGC GACGATCCGC GACGTGGCGA GCCGAGCCGG GGTCTCCGTC GCGACCGTGT CCCGGGTCCT CACCGGCAAC TACCCGGTCG CGTCCGCCAC CCGCACCAAA GTCCTGCGCG CCGTCCGCGA GCTGGACTAC GTCGTCAACG CCCACGCCCG CGCCCTGGCC GGCAACCGCT CCAAGATGAT CGCGGTCCTG CTGTCCAACC TGACCTCGCC CTTCTACAAC CGCGTCGCCT CCGGCGTGGA GCAGCAGGCG ATGGCCGAGG ACCGGCTCTG CATGGTGAGC ACCACCGGTG GCGACCCGGA GCGCGAGGTG AAGCTCGTCG AGACGCTGCG CGAGCAGAAC GTCGACGCGG TCGTCCTGGT CGGCGGCGTC GTCGACTCCC CCGAATACCG CGACCACATG GCGCGCCTGG CCCGCCTGCT GGACAGCGCC GGCTCGCGCC TCGTGATCTG CGGGCGCCCC TCACCCGGCG AAAACCTGCC GGTCACGGTC GTGGAGTACG ACAACGCCGG CGGCGCGTTC GCCGCGACCA GCCACCTGCT GTCCCAAGGG CATCGCAGGA TCCTGTTCAT CGGCGGCGAC GAGGCCAACA CCACCACCCG CGACCGCCTC GACGGATACC GCCGCGCCAT CCAGGCCTAC GGGATCGAGG CGGACCCGGC CCTGGTCATC GTCGGCAACC AGCTCCCGCC GTTCGCCTAC GCCGAACTCA AGAAGCGGCT GGCCGCCGGA CCGCCGGACT TCACCGCGGT GTTCGCCTGG GACGACCACA TCGCCGCCCG CACCCTCGTC GCACTGCGCG AGTCCGGCGT CTCCGTCCCG GACCAGGTAT CAGTGATCGG ATACAACGAC GAACAAGAAG CGCAGGACCT CTATCCAGCG CTGACCACCG TCTCGATCCC GCACATGGAA CTCGGCCGCG AAGCCGTCCG CCTCGCCCTG CACCGCGACG AAGCCGCCGC CCCGAATCAG CACGTCGTGC TGGGCACCCA TATCGTGATG CGGGATTCGG TGCGACCGCT CATCAACCGG TGA
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Protein sequence | MPRRPEADRD STTPRAATIR DVASRAGVSV ATVSRVLTGN YPVASATRTK VLRAVRELDY VVNAHARALA GNRSKMIAVL LSNLTSPFYN RVASGVEQQA MAEDRLCMVS TTGGDPEREV KLVETLREQN VDAVVLVGGV VDSPEYRDHM ARLARLLDSA GSRLVICGRP SPGENLPVTV VEYDNAGGAF AATSHLLSQG HRRILFIGGD EANTTTRDRL DGYRRAIQAY GIEADPALVI VGNQLPPFAY AELKKRLAAG PPDFTAVFAW DDHIAARTLV ALRESGVSVP DQVSVIGYND EQEAQDLYPA LTTVSIPHME LGREAVRLAL HRDEAAAPNQ HVVLGTHIVM RDSVRPLINR
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