Gene Caci_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0134 
Symbol 
ID8331459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp139484 
End bp140566 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content70% 
IMG OID644953301 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003110930 
Protein GI256389366 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAGAC GACCTGAAGC CGACCGCGAC TCGACCACCC CCCGCGCGGC GACGATCCGC 
GACGTGGCGA GCCGAGCCGG GGTCTCCGTC GCGACCGTGT CCCGGGTCCT CACCGGCAAC
TACCCGGTCG CGTCCGCCAC CCGCACCAAA GTCCTGCGCG CCGTCCGCGA GCTGGACTAC
GTCGTCAACG CCCACGCCCG CGCCCTGGCC GGCAACCGCT CCAAGATGAT CGCGGTCCTG
CTGTCCAACC TGACCTCGCC CTTCTACAAC CGCGTCGCCT CCGGCGTGGA GCAGCAGGCG
ATGGCCGAGG ACCGGCTCTG CATGGTGAGC ACCACCGGTG GCGACCCGGA GCGCGAGGTG
AAGCTCGTCG AGACGCTGCG CGAGCAGAAC GTCGACGCGG TCGTCCTGGT CGGCGGCGTC
GTCGACTCCC CCGAATACCG CGACCACATG GCGCGCCTGG CCCGCCTGCT GGACAGCGCC
GGCTCGCGCC TCGTGATCTG CGGGCGCCCC TCACCCGGCG AAAACCTGCC GGTCACGGTC
GTGGAGTACG ACAACGCCGG CGGCGCGTTC GCCGCGACCA GCCACCTGCT GTCCCAAGGG
CATCGCAGGA TCCTGTTCAT CGGCGGCGAC GAGGCCAACA CCACCACCCG CGACCGCCTC
GACGGATACC GCCGCGCCAT CCAGGCCTAC GGGATCGAGG CGGACCCGGC CCTGGTCATC
GTCGGCAACC AGCTCCCGCC GTTCGCCTAC GCCGAACTCA AGAAGCGGCT GGCCGCCGGA
CCGCCGGACT TCACCGCGGT GTTCGCCTGG GACGACCACA TCGCCGCCCG CACCCTCGTC
GCACTGCGCG AGTCCGGCGT CTCCGTCCCG GACCAGGTAT CAGTGATCGG ATACAACGAC
GAACAAGAAG CGCAGGACCT CTATCCAGCG CTGACCACCG TCTCGATCCC GCACATGGAA
CTCGGCCGCG AAGCCGTCCG CCTCGCCCTG CACCGCGACG AAGCCGCCGC CCCGAATCAG
CACGTCGTGC TGGGCACCCA TATCGTGATG CGGGATTCGG TGCGACCGCT CATCAACCGG
TGA
 
Protein sequence
MPRRPEADRD STTPRAATIR DVASRAGVSV ATVSRVLTGN YPVASATRTK VLRAVRELDY 
VVNAHARALA GNRSKMIAVL LSNLTSPFYN RVASGVEQQA MAEDRLCMVS TTGGDPEREV
KLVETLREQN VDAVVLVGGV VDSPEYRDHM ARLARLLDSA GSRLVICGRP SPGENLPVTV
VEYDNAGGAF AATSHLLSQG HRRILFIGGD EANTTTRDRL DGYRRAIQAY GIEADPALVI
VGNQLPPFAY AELKKRLAAG PPDFTAVFAW DDHIAARTLV ALRESGVSVP DQVSVIGYND
EQEAQDLYPA LTTVSIPHME LGREAVRLAL HRDEAAAPNQ HVVLGTHIVM RDSVRPLINR