Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0127 |
Symbol | |
ID | 8331452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 130199 |
End bp | 131221 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644953294 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_003110923 |
Protein GI | 256389359 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCC GCGCCGCCGC GTTACTCGCC ATGCGTCCGG ACGTCGCGCA AGCTGCGTTC CCGGCCGCGC TGCGCACCCG GCTCGACGCC GTCGTCGAGA TCGACCACGG GCTGGTCGTG ACCGACTTCG CCGAGCCGCG CGCCCGGTGG GCACTGGCCG GCGCGGAGGT CCTGCTGACC GGCTGGGGCT GTCCGCCGCT GGACGCCGAG GCGCTGGACG CGGCACCGAA CCTGCGCGCG GTGATCCACG CCGCCGGCTC GGTGAAACAC CACCTGAGCC CGGACTTCTG GACGCGCGGG ATCCTCGCGT CCTCGGCCGC GGACGCCAAC GCCTATCCGG TCGCGCAGTT CACGCTCAGC GTGATCCTGT TGGCCGGAAA GCGGATGTTC ACGATGGCGC GGCACTACGC CGAGGGCACT TACAAGCCGC CGTCGACCTC GCAGCGCTTC GGCAACGTCG GCCGCACGGT CGGGGTGGTC GGCGCGTCGC GCATCGGCCG CCTGGTGCTG CCGATGCTGG CGCGCGAGGG CTTCGAGGTG CTGCTCGCCG ATCCGACGCT GAGCGCCGCC GAGGCCGCGG CGCTGATGCC CGCGCCGTGG GCGGTGGAGC TCGTCGAGCT CGACGAGCTG CTGCGCCGCA GCGATGTCGT GACGCTGCAC GCGCCGTCGC TGCCGGAGAC CCACCACCTG CTCGACGACC GGCGCCTGGG CCTGATGCGC GACGGATCAG TACTCGTCAA CACCGCGCGC GGCGCCTTGA TCGACACCGA GGCACTGGTG CGGTGCTGCG CCGCCGGCCG GATCGACGCG TTCCTCGACG TCACCGATCC CGACGAGCCG CTGCCGCCGG GGCACCCGCT GTTCCTGCTG CCGAACGTGG TGGTGACACC GCATCTGGCC GGAGCGATGG GAAGCGAGAT CGCCCTGCTC GGCGCCTACG CGGTCGCCGA CGTCGAGCGG TACGCCGCGG GACTTCCGCT GCTCGGCGGG GTCCATCAGG ATGACCTCGC ACGGATCGCG TAG
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Protein sequence | MAGRAAALLA MRPDVAQAAF PAALRTRLDA VVEIDHGLVV TDFAEPRARW ALAGAEVLLT GWGCPPLDAE ALDAAPNLRA VIHAAGSVKH HLSPDFWTRG ILASSAADAN AYPVAQFTLS VILLAGKRMF TMARHYAEGT YKPPSTSQRF GNVGRTVGVV GASRIGRLVL PMLAREGFEV LLADPTLSAA EAAALMPAPW AVELVELDEL LRRSDVVTLH APSLPETHHL LDDRRLGLMR DGSVLVNTAR GALIDTEALV RCCAAGRIDA FLDVTDPDEP LPPGHPLFLL PNVVVTPHLA GAMGSEIALL GAYAVADVER YAAGLPLLGG VHQDDLARIA
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