Gene Caci_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0107 
Symbol 
ID8331432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp110334 
End bp110888 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content78% 
IMG OID644953274 
Producthypothetical protein 
Protein accessionYP_003110903 
Protein GI256389339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0897368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.110095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTG CCACCACCGC CCGCCCGAAG CTCGCCGCCC GGCTGTCCGG CCGCCGCCAC 
ACCTCCCGCA CCCGGCGGCT GCGCGTCATC GGCGCCGCCG GCTTCGCCGG GGTCTCGATG
GCTCTGCTGA CCGCGGAGCA CTCCGTCCCG CCAGCGCGCC GTCCGCCCCG GTTCGCCGCG
GAATCCCTGA TGAGCGGCCT GGTCGCGGTC CCGGTGCGGT TCGCCGACGC CGGCAGCACC
GGCTACCTGC GCCCGGGCGA CCGGATCGAC GTGCTGGCCG CGCACGACGC CGGTCCGGAC
GGGCCGCCGG GTCCGCCGGA GGCCTCCTCC GGCCCGATCC CCGGCCTCGG CGCCGACCCG
CCACGGGGTG AGACCGCGGT CGCCGTCGAC GTCTCAGTCC TCGAGATCGC GCACTCCGCG
GACCCCGGTT CGCTCACCCG CGCCGCCCCG GACGACGGCG GTCTGGTGTT CCTGGCTGTG
GACAACGCGA CCGCCGCCCG GCTGGCCCGG GCCGCCGTCG CGGACCGCCT GAGCTACGCG
CTGCGCCATG GCTGA
 
Protein sequence
MPTATTARPK LAARLSGRRH TSRTRRLRVI GAAGFAGVSM ALLTAEHSVP PARRPPRFAA 
ESLMSGLVAV PVRFADAGST GYLRPGDRID VLAAHDAGPD GPPGPPEASS GPIPGLGADP
PRGETAVAVD VSVLEIAHSA DPGSLTRAAP DDGGLVFLAV DNATAARLAR AAVADRLSYA
LRHG