Gene CPS_4938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4938 
Symbol 
ID3521672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp5232928 
End bp5233605 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content38% 
IMG OID637287377 
Producthypothetical protein 
Protein accessionYP_271577 
Protein GI71281201 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAA AACTTCTCCC GCTTATCATA TTAACAGCGA CTCTAACTTT CCTAACGCCA 
ACGGCTAGTG CAAGTTTAAT TCTTGGTACT GGTACTTCGG CATTAGTTGG TGGTGATTTA 
ACTGACCCTG AAAATGATGG TTTAGTTAAT TCTAACGTCA ACTATGATGC AACTTTTCGT 
TCAAGTGTAG AACCCGGTTT TGGCGGCGGT GAATTTGCAT TCAATGTATT TGATAACACC 
TTAACAAGTC GCAACGGTAA ATGGTGTTGT AGTGGCGGAA ACGTATGGGT CGAAGCAGAC 
TTTGGCACAG ACCGTTATAT ACTAGACATG TTTACGTTAT CTTCGGCAAA TGACGTACCT 
AATAGAGATT CTGATCAATG GAGAATTCTA GGCTCTAATG ATGGTATTAA TTATACTGCA 
CTTTATTCTT ATGATGTAGC TGGTCAGTCA ATTTGGGGCT CAGATCGTTT TGAAGTAGTG 
CAATTTTCAA ACAACGATGA TTATAACGCT AATACTGCTT ATAGCATTTT CCGCTATCAA 
TCGACTTCTG TTGTAAGTGG AACAAATCAT CAGTTAGGTG AAATTGAATT TTTTGGTACT 
CAGATCCCAG AACCTACAAC AATTGCTATT TTTGCCTTGG GCCTTATTGG TTTAGCCTCT 
CGTCAATTTA AGAAATAA
 
Protein sequence
MNIKLLPLII LTATLTFLTP TASASLILGT GTSALVGGDL TDPENDGLVN SNVNYDATFR 
SSVEPGFGGG EFAFNVFDNT LTSRNGKWCC SGGNVWVEAD FGTDRYILDM FTLSSANDVP 
NRDSDQWRIL GSNDGINYTA LYSYDVAGQS IWGSDRFEVV QFSNNDDYNA NTAYSIFRYQ 
STSVVSGTNH QLGEIEFFGT QIPEPTTIAI FALGLIGLAS RQFKK