Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4776 |
Symbol | |
ID | 3520549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 5060871 |
End bp | 5062691 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637287215 |
Product | glycosy hydrolase family protein |
Protein accession | YP_271420 |
Protein GI | 71280086 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.520076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACGG TTTCCCTTTA TTCTCGTTTA TGTAAACTAC TGCCACTTGC TATGGTGATT ATTGTCTCTG CTTGTAGCAG CACACCACAA CCAAGCAACC CACCTCCCCT AACCAAGGCT AATATTTATA TTAACCAGCT GGCTTTTGAC GTGCAAGCGC CCAAACAAGC AGTAGTTGCT TTACCCATAG GTGAAACAGC AAGTCGTTTT ATCGTTTATC AAGATTCAAA CATGATTTAT CAAGGTAAGC TTACTTCTCA ACCAAGCTTC TCTGAATGGG GGCAAGGTGC TCACTATTAC CTCGCTGATT TCTCGCAAGT AAAACGCCGA GGTGAATTTC ATATTGTAGT AAATACACCC AAGCAGCAAC TAGCTTCATC AACGTTCGCG ATTAAACATA ATGCTTACTT TGCACTTACC GCCAAATCAC TAATCAATTA CTTTAAAGCA AGTCGTCATA CTAATCCGAG AGATGAATCT ATTCGCATGA TTGGTACTGA ACGTTACGTT AATGTTTCAG GTGGTTGGGT AGATGCAGGA GGGGATCAGG GCAAACACTT AAGTCAGCAT ACTGAGTCTA ACTTTTTAAT TCCTCAACAA GGCGCAATAG CTACCTGGGC CATGGCAAAA TCTTATGATA GCTTAAATCG ATTGTATGAC CGCAAGGCAT TAACATTGGA GCTTGCTGAG GAAGTTATTT GGGGCGCAGA TTATCTACAT AGAATATTAG ACAGTGAAGG CTATTTTTAT ACCAATATTT ACGACCAACG AGGCTTGGCA GAAGAGCGTT TAATCTCAGG TTATCAAGGA GCTGAAGGTG ATTATAACAC TAACTTCCAA GCCGCTTTTC GTGAAGGCGG AGGCATAGCT ATTGCTGCGT TAGTAAGAGC ACATGAACTG AGTAATAAAA CAGGTGTTCA AGGTGAATTT TCTGCAAAGC AGTATTTAAT CGATGCGGAA CGTGCTTTTA CTCATTTACA AAAGAACAAC CTACGTTATG TTGATAATGG TAAAGAAAAT ATTATCGATG ATTACACTGC CCTCATTGCG GCCACTGAAC TTTATCGCAT AACTAAAAAA TCGAAATACT TAAAAACCGC GCGTCACCGT GCTCATAACT TAAATAATAG AATGACTTCA CAAGGTTGGT TTGTCAGCGA TGATGATAAT AGACCCTTTT ATCATGGGGC TGAAGCAGGA TTACCTGTTA TTGCCTTAGT TGATTATTTA GCAATAGAGC GTAATCGACA AATTAAAACT AAAACTAAAC GGACTATTAA ACTATCGCTT GATTATCAAC TCGCCTTAAA TTCTCAGGTT GCTAATCCAT TTAATTTGGC ACGCCAAACA TTTAAAAGCT ACAAAGATGG CCAGCACACT AAACAACAAG AAGGCTTCTT TATACCGCAT GCAAGTGAAG CTAGCCATGC TTGGCAAGGT GAAAATTCAC GCTTGGCCTC ATTAACCGCT GCAGCAATAT GGGGTGGTAA AATCACTCAC AGTGATAAAA GTGGTGCTTT TGGTATCAAT GATGAACTCG CTTATTTTGC ACAAAGCCAA ATAGATTGGA TCATGGGTAA AAATCCTTAC CAAGTAAGTA TGTTATACGG TTTTGGCGTT AATAACCCAC CGCATGCTAA AAGTGCGGGT ACTATGTTAA ATGGTGGTAT TTCAAATGGT ATCACTGGCG CAACATCATA CCTAAATGGC CGTGGCATTA CTTGGGCTGA AGGACCTGAT GAAAATAATA GGCGCTGGGT AGAACAATGG TTACAAAATT CAACCTGGTA TTTGTTAGCT ATGACGGCAA TGACTGAGTA A
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Protein sequence | MTTVSLYSRL CKLLPLAMVI IVSACSSTPQ PSNPPPLTKA NIYINQLAFD VQAPKQAVVA LPIGETASRF IVYQDSNMIY QGKLTSQPSF SEWGQGAHYY LADFSQVKRR GEFHIVVNTP KQQLASSTFA IKHNAYFALT AKSLINYFKA SRHTNPRDES IRMIGTERYV NVSGGWVDAG GDQGKHLSQH TESNFLIPQQ GAIATWAMAK SYDSLNRLYD RKALTLELAE EVIWGADYLH RILDSEGYFY TNIYDQRGLA EERLISGYQG AEGDYNTNFQ AAFREGGGIA IAALVRAHEL SNKTGVQGEF SAKQYLIDAE RAFTHLQKNN LRYVDNGKEN IIDDYTALIA ATELYRITKK SKYLKTARHR AHNLNNRMTS QGWFVSDDDN RPFYHGAEAG LPVIALVDYL AIERNRQIKT KTKRTIKLSL DYQLALNSQV ANPFNLARQT FKSYKDGQHT KQQEGFFIPH ASEASHAWQG ENSRLASLTA AAIWGGKITH SDKSGAFGIN DELAYFAQSQ IDWIMGKNPY QVSMLYGFGV NNPPHAKSAG TMLNGGISNG ITGATSYLNG RGITWAEGPD ENNRRWVEQW LQNSTWYLLA MTAMTE
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