| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4621 |
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| Symbol | |
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| ID | 3521538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4882656 |
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| End bp | 4883816 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637287060 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_271268 |
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| Protein GI | 71281069 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA CCCTAAAATC TAGCTGGTTA GCGCAACGAC CTTACCTTAT TGCAGCACTA
ATCACCCTTG TTTTAGTGCT ATGGATGGCT TCTGGCCCTA GTGTTGCAGA GCAAAAGTCT
GAGATAAAAG CACAAATTCC TAGTCATGAT GAAAAGCAGA TAACTGCACA AGTTAAAGTT
GAAACACGAC TTGGACAACA TATTCATAAA ACAATTGAGC TTTATGGTCG CACCGAGCCT
GATCGCATCA CGACATTAAA AGCTGAAATA CACGGAAAAA TTATTCAGGT ATTAGCAAAA
AGAGGTTCAA AAGTTGCTAA AGGTGAAATT ATTGCAAAAA TTGCTTTAAA TGATTTACCT
GCTCAATTAA CCCGTAGCCA AGCATTATTG AACCAACGTG AAGTAGAATA CGAAGGTGCG
TTAAAGCTTA ATAAACAAGG TTATCAAGGT AAGGTGCATT TAGCACAATC ATATGCTGCA
CTGGAATCGG TTAACGCTGA AATAAAGCGA TTAGAGTTAG ACATTGCCCA TACCATTATT
AAAGCGCCTT TCACCGGAAT TCTTAACACA CGCTATGTTG AAGTGGGTGA CTACGTCGCC
TCGGGTGATG ATATCGCCAT GATTGCTGAT TTAGACCCGC TTATTGTTAG AGCGCATGCC
ACCGAACAAC AAATAAGTCA GTTGTCTGTT GGTCAAGTAG CGCAAGTAAC CTTATTAAAT
GGTGCACAAG CACAAGGTAA GCTGCGTTAC ATTGCCAGTG TCGGTAATGA TGCGACCAAT
ACTTTTAAAA TTGAAGTGGA AATTGATAAT AAAAAGGCGA ATTTATTGGC GGGCTTAAGC
AGTGAATTGA CCATAGACTT AGCCAGATTG TCTGCAATAA AAATATCACC AGCACTGCTC
GCTTTAGATG AGCAAGGTAA TATCGGTGTT AAATCGGTAA AAAAATCAAT TGTTCACTTT
ACGCCAATAG AGATCATTAA AAGTGAAAGT GATGGCATAT GGTTGACAGG TCTTGGCGAA
CAAGCCGATA TCATTGTCTT AGGTCAAGGC TTCGTTCGTG CAGGGGACAG AGTGGAGGCC
ATCTTCGATA AGGTAGATGA TAAAGCTAGC AATAGCACAG ATAAACAAGC TGCTACTGTA
ACCGCCGCTA CACAAAAATA G
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| Protein sequence | MKLTLKSSWL AQRPYLIAAL ITLVLVLWMA SGPSVAEQKS EIKAQIPSHD EKQITAQVKV
ETRLGQHIHK TIELYGRTEP DRITTLKAEI HGKIIQVLAK RGSKVAKGEI IAKIALNDLP
AQLTRSQALL NQREVEYEGA LKLNKQGYQG KVHLAQSYAA LESVNAEIKR LELDIAHTII
KAPFTGILNT RYVEVGDYVA SGDDIAMIAD LDPLIVRAHA TEQQISQLSV GQVAQVTLLN
GAQAQGKLRY IASVGNDATN TFKIEVEIDN KKANLLAGLS SELTIDLARL SAIKISPALL
ALDEQGNIGV KSVKKSIVHF TPIEIIKSES DGIWLTGLGE QADIIVLGQG FVRAGDRVEA
IFDKVDDKAS NSTDKQAATV TAATQK
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