| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4537 |
|---|
| Symbol | |
|---|
| ID | 3519042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 4789950 |
|---|
| End bp | 4790930 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637286977 |
|---|
| Product | putative sodium/calcium exchanger protein |
|---|
| Protein accession | YP_271185 |
|---|
| Protein GI | 71278357 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGAAC AAATATTTAT ATTACTCATT GCCCTTGTTG TTTTAGTTTG GAGTGCCGAT
AAATTCGTTT TTGGCGCTTC ATCATTAGCA AGAAACTTAG GTATTTCACC AATGATAATT
GGTTTAACTA TCGTTGCTAT GGGTTCTTCA GCACCAGAAA TGATGGTGGC TGCAACGGCA
TCAATGCAAG GTAACCCAGA TACAGCCATT GGCAATGCTA TTGGTTCAAA CATTACCAAT
ATTGCCTTGG TACTTGGTAT TACCGCTTTA CTACAGCCGT TAACCGTTTC ATCACAAACA
ATAAAGCGTG AAATCCCCCT TATATTAGCC GTTACCGCCT TAGGGTATTG GTTACTTTTT
GATAATCACT TTAGTTTCAT TGAAGGTATT ATCTTGATAT CTGGCTTTGC CATCTACATT
ATTACACTCC TTGTCATCAC ATTGAAGAAA ACAAGGGGTA AACCCAGTGA TGATCCGTTG
ATTATTGAAG CAGAACAAGA TGTTGCCGCT GCCGTTAGTA TGAAGTTATC TTTAATTTGG
CTGGGTGTTG GAATCATTTT ATTACCATTG AGCGCGAGCT TTTTGGTTGA TTCTTCTGTA
TATATTGCTA AAGCTTATGG TATTAGTGAC TTAGTTATAG GTTTAACTAT TATAGCGATA
GGTACCAGTT TACCTGAGCT CGCCGCAAGC ATTATGAGCA TCATTAAAAA AGAAGATGAT
TTAGCATTAG GCAATATAAT AGGCTCTAAC ATTTTTAATA TTTTAGCTGT TCTCCCAATA
GCCGGTCTAA TAGCTCCTGG TAATATTGAC GCTTTAGCTG CCAGTAGAGA TGCGCCTTAT
ATGTTAGGTA TTACTTTGCT GCTATTTATC TTATGTTTTA GTCGCCGCTT AGGTGCATTT
AGAATTACTC GTGCCAAGGG TGCATTATTA CTGTTAAGCT TTATCGCTTA CCAAGTATTA
CTTTTTAGTC AATTGTCATA A
|
|---|
| Protein sequence | MLEQIFILLI ALVVLVWSAD KFVFGASSLA RNLGISPMII GLTIVAMGSS APEMMVAATA
SMQGNPDTAI GNAIGSNITN IALVLGITAL LQPLTVSSQT IKREIPLILA VTALGYWLLF
DNHFSFIEGI ILISGFAIYI ITLLVITLKK TRGKPSDDPL IIEAEQDVAA AVSMKLSLIW
LGVGIILLPL SASFLVDSSV YIAKAYGISD LVIGLTIIAI GTSLPELAAS IMSIIKKEDD
LALGNIIGSN IFNILAVLPI AGLIAPGNID ALAASRDAPY MLGITLLLFI LCFSRRLGAF
RITRAKGALL LLSFIAYQVL LFSQLS
|
|---|
| |