| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4502 |
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| Symbol | gltD |
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| ID | 3522364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4748926 |
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| End bp | 4750353 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637286942 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_271150 |
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| Protein GI | 71281892 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA ATGTTTATCA ATTTATTGAT GTAAAACGAA TAGACCCAGC AAAGAAGTCG
ATTAGTGAAC GTAAAATTAA CTTCGTTGAA ATTTACCAAC CGATGGGTAA TGAACAAAGT
GCGGGTCAAG CTGACCGCTG TCTGGACTGC GGTAACCCAT ATTGTGAATG GAAATGCCCC
GTGCATAATT ACATTCCACA ATGGCTTGAA CTAGTCACTG AAAATCGTAT CTTTGAAGCA
GCTGATTTAT GTCATGAAAC CAACAGCTTG CCAGAGATGT GTGGTCGAGT TTGCCCACAA
GATAGGCTTT GTGAATCGGC TTGTACCTTA AATGATGAGT TTGGTGCGGT AACCATAGGT
AATATCGAAA AACATATTAC TGATACTGCC ATTGCACAGG GTTGGAAGCC CAATTTATCT
CACGTAGTAA AAACAGGTAA ACGTGTAGCC GTTATTGGTG CAGGTCCCGC AGGAATTGGC
TGTGCTGACG TATTAACTCG TAATGGTGTT GATGTTGTGG TTTATGACAG ACACGCACAA
ATTGGTGGTT TACTTACTTT TGGTATTCCA TCGTTCAAAC TAGAAAAAAG TGTTATTCAA
ACGCGCCGTG AAATTTTAGA AGGCATGGGT ATAGAGTTTC GCTTAAATAT TAATGTTGGC
ACTGATATTA GTTTTAAAGA TATCAGTGAT GAATATGATG CTGTTTTCTT AGGCTTAGGT
ACTTATACCG ATATGAGTGG CGGCTTTGAC AATGAAGGAG CTCAGGGCGT TTATAACGCA
TTAGATTTTT TGATTGGTAA TACTCAGAAT TTAATGGGAT TTACTAAAGC GGACAATGCT
CAAGTTAAGC CTTATGTAAA TTTCAAAGAT AAAAAGGTTA TTGTACTGGG TGGTGGTGAT
ACTGCCATGG ATTGTGTACG TACTTCCATT AGGCAAGATG CAACAAGCGT GACGTGTGCA
TATCGTCGTG ATGAAGCCAA TATGCCTGGT TCTCCTCGCG AAGTTCAAAA TGCCAAAGAA
GAAGGTGTTA ATTTCGAGTT TAACCTTCAG CCGCTCGACA TTGCCGTGAA CGAACAAGGT
GTTGCTATTG GTGTTAAGTT TGTTAAAACT CAACTCGGCT CACCAGATGC TAACGGTAGA
CGCAACCCAG AGCCTATAGC CGACAGTGAG TTTATTATGG AAGCTGATGC CGTTGTTATT
GCTTTTGGCT TTTTACCAAG CCCACCTCAA TGGATGGTCG ATGCTGGCGT AGAGTTAGAC
TCTCGTGGTC GTGTTGTTGC TGTGGATAGC TCTGACTTTG CCCTGCAAAC AAGTAAGCAG
AATGTCTTCG CCGGTGGTGA TATGGTTCTT GGATCTGACT TAGTCGTTAC TGCCATTGAC
CAAGGTCAAA AAGCAGCTAT GGGTATCTTA GATTACGTGA CTCAATAG
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| Protein sequence | MSKNVYQFID VKRIDPAKKS ISERKINFVE IYQPMGNEQS AGQADRCLDC GNPYCEWKCP
VHNYIPQWLE LVTENRIFEA ADLCHETNSL PEMCGRVCPQ DRLCESACTL NDEFGAVTIG
NIEKHITDTA IAQGWKPNLS HVVKTGKRVA VIGAGPAGIG CADVLTRNGV DVVVYDRHAQ
IGGLLTFGIP SFKLEKSVIQ TRREILEGMG IEFRLNINVG TDISFKDISD EYDAVFLGLG
TYTDMSGGFD NEGAQGVYNA LDFLIGNTQN LMGFTKADNA QVKPYVNFKD KKVIVLGGGD
TAMDCVRTSI RQDATSVTCA YRRDEANMPG SPREVQNAKE EGVNFEFNLQ PLDIAVNEQG
VAIGVKFVKT QLGSPDANGR RNPEPIADSE FIMEADAVVI AFGFLPSPPQ WMVDAGVELD
SRGRVVAVDS SDFALQTSKQ NVFAGGDMVL GSDLVVTAID QGQKAAMGIL DYVTQ
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