Gene CPS_4380 details

Gene Information

• Locus tag: CPS_4380
• Symbol: rsgA
• ID: 3521176
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4615530
• End bp: 4616588
• Gene Length: 1059 bp
• Protein Length: 352 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637286821
• Product: ribosome-associated GTPase
• Protein accession: YP_271029
• Protein GI: 71280707
• COG category: [R] General function prediction only
• COG ID: [COG1162] Predicted GTPases
• TIGRFAM ID: [TIGR00157] ribosome small subunit-dependent GTPase A

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCTAAGG TAAAAAAACT GACCAAAGGT CAGCAAAGGC GCATTAAAGC CAATCATGAT 
AATAGATTAC ATGGTAAAAC CACTAAAAAT AAAGATAAAG TGCAATGGGA AGATGACGAC 
TTAGGCACTC CTCAGCAAGG CGTTATTATT AGTCGGTTTG GCCAACATGC CGATGTCGAA 
AGCGAACTTG GTGAAATATA CCGCTGTAAT TTACGTCGTT CTATTGGCTC GCTTGTCTGT 
GGAGACAAAG TACTTTGGCG TCTTGGCAGA GAAACTCAAC ATAGTATCAC AGGTATAATA 
GAGGCTGTTC ATGAACGTGA CTCTGTATTA AGTCGTCCCG ATGTTTATGA TGGCGTTAAA 
CCTATCGCGG CAAATATCAG TCAAATCCTC ATTGTCTCTT CTGTGTTGCC TGTTTTTAAT 
AGCGATATTA TTGACCGCTA CTTAGTAGCT GCAGAGCAAA CGGGGATTAC TCCTGTTATT 
GTGCTGAATA AAACTGATTT ATTAGACAGT ATAAGCGCTG AAGAACAAGA GAATATAGCC 
AAGCAATTGA AAATTTATCA AGATATTGGC TATCAAGTGC TTTACGCTAG CAGTAAGTCT 
CGCGATGGTA TAAGTGAACT AAAAATGCAG CTTGCCCAGC ATACCAGTAT TTTCGTTGGT 
CAGTCTGGTG TCGGGAAATC AACGTTAGTT AATGCTCTCA TGCCAGATTT AGGGATATTA 
ACAAAAGAAG TCTCGGACAA CTCAGGTTTA GGGCAACATA CCACGACAGT GGCACGCTTA 
TACCACTTTA ATGAGGGGGG GGATTTAATT GACTCACCAG GTATTCGTGA ATTTGGTTTA 
TGGCATTTAA CACCAGAACA AGTATGTCAT GGTTTTGTTG AGTTCTCGGA ATTTCTTGGC 
TTATGTAAAT TCAGGGATTG TAAGCATCAA ACAGATCCTG GCTGTGCTCT AATCGCTGCA 
GCAGAAAATG AACAAATAAA TCCAGCTCGC TTAGCAAGTT TTCAACGTAT ATTAGCCAGC 
CTAAATGATA ATAAATTAAC TTCTCGCTTT AATAATTAA 

 

Protein sequence

MSKVKKLTKG QQRRIKANHD NRLHGKTTKN KDKVQWEDDD LGTPQQGVII SRFGQHADVE 
SELGEIYRCN LRRSIGSLVC GDKVLWRLGR ETQHSITGII EAVHERDSVL SRPDVYDGVK 
PIAANISQIL IVSSVLPVFN SDIIDRYLVA AEQTGITPVI VLNKTDLLDS ISAEEQENIA 
KQLKIYQDIG YQVLYASSKS RDGISELKMQ LAQHTSIFVG QSGVGKSTLV NALMPDLGIL 
TKEVSDNSGL GQHTTTVARL YHFNEGGDLI DSPGIREFGL WHLTPEQVCH GFVEFSEFLG 
LCKFRDCKHQ TDPGCALIAA AENEQINPAR LASFQRILAS LNDNKLTSRF NN