Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4284 |
Symbol | |
ID | 3519643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4515389 |
End bp | 4516342 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286725 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
Protein accession | YP_270934 |
Protein GI | 71278159 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTGCAG TATTTTTAGA TGAACAAACC TTCAGTTCTA CCATTGATTT TTCTGTCATT GAACAACAGG TAAGCCAGTT AGTTTGTTAT GCCAATACAT CACCTAATGA GGTTATAAAG CGCTGCCTAG ATGCAGATAT TATTATTACC AATAAGGTAC AGTTAACGGC AGAAATGCTA TCTGCCTTAC CAAACGTAAA GCTCATCTGT ATCAGCGCAA CGGGTTATAA CAATGTAGAT ATTGAAGCTG CTCGTCACTT AGATATTGCC GTAACGAATG TTAGCGGTTA CGCAGGGCAA TCTGTTGCAC AATATGTTTT TGCCCAATTA CTCGAGTATT ATCAACAAAC GAGTCACCAT AATAGCAACA CGGAACAAGG TTTATGGTCA AGAAATGATA CTTTTTGCTA TCACGGTAAT AGCATCAGCG AATTAGCAGG AAAAACACTC GGTATTATTG GTTACGGAAG TTTAGGTAAA GCTGTTGTTG ATATAGCACA GGCTTTCAAT ATGAAAGTGC TCATTAGTGA ACGCCCTCAG GCCAGCACTA TTCGCGCAGA GCGAGTTTCT TTTGAACAGG TTATTGAAGA GGCTGATATT ATCAGTTTAC ATTGCCCACA AACCCCTGAA ACTGAAAACT TCATTAATGA AAGTGTACTA GCTCGCATGA AAAATACTGC CGTATTAGTT AATACTGCTC GAGGTGCATT AATTGATGAA CCTGCGTTAT TGGATGCTTT AAAAACAAAA GAAATTGCCT ATGCTATTTT AGATGTATTA TCACAAGAGC CGCCTCCAGC TGATCACATA CTACTTAATA ACAAGCTTTC TAATTTAAAA ATAACCGCAC ATATCGCTTG GGCTAGCAGT GAAGCTCAAC AGCGTTTGAT TGATTTATTA AGCCAAAATA TTATTGCCTT TACCCAAGGC GAACAATTAA ATCGTTTAAC TTGA
|
Protein sequence | MRAVFLDEQT FSSTIDFSVI EQQVSQLVCY ANTSPNEVIK RCLDADIIIT NKVQLTAEML SALPNVKLIC ISATGYNNVD IEAARHLDIA VTNVSGYAGQ SVAQYVFAQL LEYYQQTSHH NSNTEQGLWS RNDTFCYHGN SISELAGKTL GIIGYGSLGK AVVDIAQAFN MKVLISERPQ ASTIRAERVS FEQVIEEADI ISLHCPQTPE TENFINESVL ARMKNTAVLV NTARGALIDE PALLDALKTK EIAYAILDVL SQEPPPADHI LLNNKLSNLK ITAHIAWASS EAQQRLIDLL SQNIIAFTQG EQLNRLT
|
| |