| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4262 |
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| Symbol | sfcA |
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| ID | 3519838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4493556 |
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| End bp | 4495244 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286703 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_270912 |
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| Protein GI | 71279383 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCAAT CTCAACGCCC ACTTTACATC CCTTATGCCG GTCCATCATT ATTAGAAACC
CCTTTACTGA ACAAGGGCAG TGCTTTTAGC AAAGAAGAAC GCGGTAGTTT TAACCTAACT
GGGCTTTTGC CACCACGCTT TGAAAGTATT GATGAACAAG CAGAGCGTGC ATTTCGTCAG
TACAGTTGTT TTCAAACTAA CATCAATAAG CATATTTATT TACGTGCTAT CCATGATAAT
AATGAAACGT TGTTTTTTAA ATTGGTACAA AATAATCTGG CCGAAATGAT GCCTATTATT
TATACCCCAA CGGTTGGCGA TGCTTGTGAG CAGTTTTCTG ATATTTACCG CAGCTCACGC
GGTTTGTTTA TCTCTTATGA AGATAGATTT AATATTGATG ACATGCTGCG TAATGCGACT
AAAAATAAAG TAAAAGTGAT TGTAGTTACC GATGGTGAAC GTATTTTGGG TCTTGGCGAT
CAAGGCATTG GCGGTATGGG TATTCCAATC GGTAAGCTCT CTCTTTATAC CGCTTGTGGT
GGTATTAGCC CAGCGCATAC TTTGCCGGTA ATGCTTGATG TAGGTACTAA TAACCAGAAA
CTATTAGATG ACCCTATGTA CATGGGTGCT CGACATAAGC GTATCGATCA AGATTCCTAT
GATGAATTTT TAGAGTTATT TATCAGCGCA GTTAAACGTC GCTGGCCAAA TGTTTTGTTG
CAATTTGAAG ATTTCGCACA GCCAAATGCG ATGCCTTTAT TGCAACGTTA TAAAGATAGA
ATCTGTTGTT TTAATGATGA TATTCAGGGA ACTGCTTCGG TAACTGTTGG GACTTTACTG
GCTGCTTGTC GTAGTAAAGG CTCTAAACTC TCAGAGTTGA ATGTTGCTTT TGTTGGTGCA
GGCTCTGCAG GTTGTGGTAT TGCCGAACAA ATTATCAGCC AGATGATGAA TGAAGGCCTT
GGTGCCGAGC AAGCCCGTAG CCAAGTGTTT ATGGTTGATA GGTTTGGTTT GTTAACGCAG
GGTATGGGCG AACTTCGTGA TTTTCAGCAA AAACTAGTAC AAAGCAATGA AGCCATCGCT
GAGTGGGATA TTGCTGGAGA GTTTGCCTCA CTTGTTGAAG TAATGCACGG CGCTAAACCT
GATATTCTTA TTGGTGTCTC TGGCCAAGCG GGATTATTTA CTGAAAAAGT TATTACCGCG
ATGAAGTCTC ATTGTGAGAT GCCGATAATC TTCCCGTTAA GTAATCCATC TCGTCAAGTT
GAAGCAACAC CTAGCCAAGT TATTAATTGG ACACAAGGGC AAGTAATTAT TGCAACAGGA
AGCCCGTTTG ATCCTATTGA GTATCAAGGA AAAACGTTCC CAATTGCTCA ATGTAATAAT
AGTTACATCT TCCCTGGTGT TGGCTTAGCT GTTGTTGCGG CAAATATCAG TCGAATTACC
GATGGGATGT TACAAGTGGC GAGTGAAACC TTAGCTGCGG CATCACCGCT TGCAAATGGC
GAGTCTGATG AGTTATTGCC ACCGTTAACG TCTATTGCAC AATTAAGTAG GGATATTGCT
TTTGCTATTG CTAAAGTAGC TTATAAACAA GGATTAGCAT TGGAGCTAAC TGATGATGAG
TTGTTAGCAA AAATAGAGCA TAATTTTTGG AAACCTGAAT ATCGTCAATA CCGTAGAACA
AGCTTGTAA
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| Protein sequence | MPQSQRPLYI PYAGPSLLET PLLNKGSAFS KEERGSFNLT GLLPPRFESI DEQAERAFRQ
YSCFQTNINK HIYLRAIHDN NETLFFKLVQ NNLAEMMPII YTPTVGDACE QFSDIYRSSR
GLFISYEDRF NIDDMLRNAT KNKVKVIVVT DGERILGLGD QGIGGMGIPI GKLSLYTACG
GISPAHTLPV MLDVGTNNQK LLDDPMYMGA RHKRIDQDSY DEFLELFISA VKRRWPNVLL
QFEDFAQPNA MPLLQRYKDR ICCFNDDIQG TASVTVGTLL AACRSKGSKL SELNVAFVGA
GSAGCGIAEQ IISQMMNEGL GAEQARSQVF MVDRFGLLTQ GMGELRDFQQ KLVQSNEAIA
EWDIAGEFAS LVEVMHGAKP DILIGVSGQA GLFTEKVITA MKSHCEMPII FPLSNPSRQV
EATPSQVINW TQGQVIIATG SPFDPIEYQG KTFPIAQCNN SYIFPGVGLA VVAANISRIT
DGMLQVASET LAAASPLANG ESDELLPPLT SIAQLSRDIA FAIAKVAYKQ GLALELTDDE
LLAKIEHNFW KPEYRQYRRT SL
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