Gene CPS_4191 details

Gene Information

• Locus tag: CPS_4191
• ID: 3521895
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4412758
• End bp: 4413447
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637286633
• Product: PspA/IM30 family protein
• Protein accession: YP_270842
• Protein GI: 71281423
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATAT TTAAAAAAAT AATGACCGCA ATACGTGGCG GTGCATCAGA AGCTGGTGAA 
GCTATCATTG ATGCAAATGC AACCCGTATC TTTGAACAAG AAATACGTGA TGCTGAAAAT 
CACCTTACCA AAGCAAAACG TGATTTAACA GGTGTTATGG CTGAGCAAAT GTCAGCAAAA 
CGTGAAGTTG ATCGTTTAAC CCGTGAAGTT TCAGAACACG AAGGTTATGC AACACAAGCA 
CTCGAAAAAG GTGATGAAAC ACTAGCACTT GCTGTAGCAG AAAAAATTGC TACCTTAGAA 
GGTACCTTAG CCGATCAGCA ACAAGCTCAC GATAGTTTTA GTGGCAATGC TGAACGTTTG 
AAAGAGTTAG TTAAGAGAAG TGAGCGTCAA GTTGCCGAGC ATAAACGTCA ACTGTCTATG 
GTTAAAACCA CTGAAAGTGT ACAAAAAGCG ACGTCAGCTA TTACCGATAA CTTTTCATCA 
AGCAATTCTA AGCTATTAAG TGCGAAAGAT TCTTTAGAAC GTATTAAAGC TAAGCAACAA 
AAGTTTGATG ACAAAATGAA AGCGGGTGAG TTACTTGAAT CTGAAAATTC GGATTCATCA 
TTACAAGCGC AGTTAAAAGC CGCAGGTATT GGCTCACAAG ACAATAGCGC TAACTCAGTA 
TTAGAGCGTT TAAAAGCTAA ACAAAAGTAA 

 

Protein sequence

MSIFKKIMTA IRGGASEAGE AIIDANATRI FEQEIRDAEN HLTKAKRDLT GVMAEQMSAK 
REVDRLTREV SEHEGYATQA LEKGDETLAL AVAEKIATLE GTLADQQQAH DSFSGNAERL 
KELVKRSERQ VAEHKRQLSM VKTTESVQKA TSAITDNFSS SNSKLLSAKD SLERIKAKQQ 
KFDDKMKAGE LLESENSDSS LQAQLKAAGI GSQDNSANSV LERLKAKQK