Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4168 |
Symbol | |
ID | 3520741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4384240 |
End bp | 4385100 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286611 |
Product | hypothetical protein |
Protein accession | YP_270820 |
Protein GI | 71280277 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3741] N-formylglutamate amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.549954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTGAGC AACGTACCGA AGAAATAACC GAGCAATTAA CAGAACAACA GATTATTAAG AAAATTAATA AACGTCAGTG TTTTATCGCT ACCGTAGTTG GCGGTGCTTT TACCCTCAAA ATTGATAAAT ATTTGCCTGC TATGTCGGCG GCTATTCATG ACGGTAGTAA CTTTAGAGCA GAGCTTGAAG ATAACTGCTT GCTAGAAAAG AGCGATCGTT ATTATGAAGA AGATCCCTAC ACGGGTAGTT TCATTGCCAA ACAAGCGATT ACTTTAATTG CCCATGACTC ACGTTATGAA TATGATTTAA ATCGTGGTAC TGATGAGTGT GTCTATGAAA CAGCTTGGGG TAAAGAAATA TGGAAAACCC CGCTTAGTGA AGAGATGATT GCCAAAAGTA AGGCCAAGCA TGCACAATTT TATCGCATTG TTGCGGCTGT AGTTGAGGCA TTAGCAGCAG ATTTTGGCCA ATGTGTTGTT TACGATAATC ATTCGTATAA TTTTAAGCGT CATGAGCGAA AAGATTTACC CGTACTTAAT GTGGGCACAA CGTCAGTAAA AGGCGAGCAA TGGCGACCGA TTATTGATAG TTGGCTTAGT GCATTACAAA ACATGAGTGT GGATGGTATT GAAGTGACGG CGGCAGAGAA TGATATTTTC TACGGTAAAG GTCGCTTAGC TGGTTTTTGT CATAGTCGAT ATGACAATGT TTTAGTACTG GCAACTGAAG CTAAAAAAGT CTTTATGGAT GAGCTTACAG GTCAAGCTGA TGCCGTTGTT TTACCTTCAT TGCAGCACGT TTATAATAAT ACTGTTGCTG AGCATACTCA GTGGTATATC AATAACTATC ATAAAAGCTA A
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Protein sequence | MTEQRTEEIT EQLTEQQIIK KINKRQCFIA TVVGGAFTLK IDKYLPAMSA AIHDGSNFRA ELEDNCLLEK SDRYYEEDPY TGSFIAKQAI TLIAHDSRYE YDLNRGTDEC VYETAWGKEI WKTPLSEEMI AKSKAKHAQF YRIVAAVVEA LAADFGQCVV YDNHSYNFKR HERKDLPVLN VGTTSVKGEQ WRPIIDSWLS ALQNMSVDGI EVTAAENDIF YGKGRLAGFC HSRYDNVLVL ATEAKKVFMD ELTGQADAVV LPSLQHVYNN TVAEHTQWYI NNYHKS
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