| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4160 |
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| Symbol | |
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| ID | 3519113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4370153 |
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| End bp | 4371040 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637286603 |
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| Product | LysR family substrate binding transcriptional regulator |
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| Protein accession | YP_270812 |
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| Protein GI | 71278272 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.415883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATTC AAACACCAAT ACGTGGCTTA CGTTCATTTT GTGTTGCCTC AAAATGCTTA
AGCTTTAAAC ATGCAGCAGC ACAATTATTT TTAACTCCAT CAGCGGTTAG TCACCAAATA
AAACAACTAG AAGAACAATT AGGTTTTATG CTCTTCAAAC GAAACACCCG CTCAATTGAA
CTAACAAGTT CAGGTAAACA ATTTTACCAG TCAATACAGC CAATAATTCA CCAATTGGAA
TCTACCATAT CGGAATTTAC CCACAACCAA CAAAATCATA CCATTGTAAT TAGTTTGCCC
GAGTTTTTTG CCAGTGAATT ATTTATTCCT CGCTTAAGCG AATGGTCTGA AAAGAACCCA
TCAATTAATC TTCAGTTAGA GACTGTAAAG GCAGGCAGTG AACCATCACA GATTGCCGAT
CTATCTATCG TATTAGCTAA TGGAAAGCCA AATGCAAGTA TCGTTCAGGA ACTATTTCCA
ATTCGTTATG CTGCGGCTTG TAATAAAAAG CTCTACAAAA AACTTAAAAA CTCTGGCTTT
AAAGCACTAA AAAATACTCC GCTAATATTA CATAGGTCCA GACCTTGGTC TTGGCATCAA
TGGGCTGAAA ATCTAGGTGT TAACGATTTT GATCCTAAGC AAATTATACA GTTTGATAGT
ATGTTTGGTG TCGCTCGCGC AGCACAACAA GGTATGGGAA TAGCATTAGT CCCTTTACCA
ATGAGTAAAA CATGGTTTAG TGAGCAGCTA TTAGTTAAAT TATTTGACGA AGAGCTAAAT
ACCAATGATA GATATTATTT AATTCAACAT GAAAATATGG AGAGTAAAGT AGAGTTAACA
TTATTTGCCA ATTGGGTGAA AGAAACCTTC ATGACTGACT ACCTGTAG
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| Protein sequence | MSIQTPIRGL RSFCVASKCL SFKHAAAQLF LTPSAVSHQI KQLEEQLGFM LFKRNTRSIE
LTSSGKQFYQ SIQPIIHQLE STISEFTHNQ QNHTIVISLP EFFASELFIP RLSEWSEKNP
SINLQLETVK AGSEPSQIAD LSIVLANGKP NASIVQELFP IRYAAACNKK LYKKLKNSGF
KALKNTPLIL HRSRPWSWHQ WAENLGVNDF DPKQIIQFDS MFGVARAAQQ GMGIALVPLP
MSKTWFSEQL LVKLFDEELN TNDRYYLIQH ENMESKVELT LFANWVKETF MTDYL
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