| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4117 |
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| Symbol | |
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| ID | 3518736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4332134 |
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| End bp | 4334980 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286560 |
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| Product | hybrid sensory histidine kinase BarA |
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| Protein accession | YP_270772 |
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| Protein GI | 71278636 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.598015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAA TAAGCCTGAA AGACTGGGTT ATCATACTCA CTATAATACC AACCACCTTA
ATCGGTTTTG GTTTAGCTAG TTATTTTTCT TATAGCCGCT CCGTTGAACT TAATGACTTT
CTCGAACAAC GCGCTAAAAG CATTATTGAA CCGATTGCCA TTGCCAGTAA AGACCCTTTA
TTGAGCAAGA ACAGAGATAA ACTTCGTCAA TTGATCGGCT TTACTCACCG TAATCAATCA
AGCATAGTAA AAAGCATTGT TATTTTTACT GAAGATAACC AGGTTTTTGT TACCAGTGCT
TACCATGGTG ATACCAATTT AATGCGACTA AAAGCTGGGG TAGAGTTACC ACACCACACG
AACACTGAAA CATTATCTGA TTATATAATT TTTAGAACCC CCATTATTGA TGAGAACTAC
AACAATCAAA GCAACGCAAA TATTACCGCA ATGGCCAGTT CTGAATATAA TTATGCTACC
AATAATTCAA AACCAGTAAT TATTGGCTAT ATAGCCATGC AAATTGATAA AAGCCATCTT
AATTTTCAGC AACAAAGCCA ATTTATAGTC GCATTTGCTT TTGCCTTACT AGGCTCATTA
CTTAGCGCTA TTTTTGCAAT TAGGCTCATT AAGAAAGTAA CGAAGCCTAT TAACTCTATG
GTGCAAGCAA TTGAGCGAAT AAGAGAAGGG AAATTAGAAA GTAGAGTGAG TGGTCAACTC
ATTGGTGAGC TGAATTTTTT AAAAAATGGT ATTAATGCCA TGGCGCAGTC ACTCGACGGT
TACCAAAATG AAATGCAGGC CAGCATAGAT CAAGCAACAA TAGACTTACG AGAAAGTTTA
GAACAATTTG AAATTCAAAA TGTCGAACTC AGTATCTCCA AGCGTAAAGC GCAAGAAGCC
AACAGAGTAA AATCAGAGTT TTTAGCTAAT ATGAGTCATG AGTTGCGAAC GCCACTCAAT
GGAGTAATAG GCTTTACCCG ACAAGTACTA AAAACGCCAC TCACTGAAAA TCAACGTGAT
TATTTACAAA CAATTGACCG CTCTGCAAAC AACTTATTAA CCATAATTAA TGATATTCTC
GACTTTTCAA AACTTGATGC CGGCAAAATG GTTACTGAAA ACATTCCTTT TTCTTTAAGG
GAATCTATTG ATGAAACCCT TACACTATTG GCGCCATCAG CCCATAAAAA GAATATTGAA
TTATCTATAA ACCTTCCACA AGAACTACCT GATTCTCTTG TTGGTGACAC CATGAGAATA
AAACAAATCA TCACCAATTT GGTCAGTAAT GCGATAAAAT TTACGCCACA AGGCTCTGTT
GCTGTCGATA TAACCAGTGA AGAAATAAGT CAGAACAATA TAAAATTAAA AGTCATTGTT
ACCGATACCG GTATTGGTAT GACAACCAAT CAGCAAAGAA CCATTTTTGA TGCTTTTACG
CAAGCAGATC AAAGTATCAC CCGCTTATAT GGTGGTACTG GGTTAGGTCT GGTAATTTGT
CAGCGACTTG CCCAAGAGAT GAATGGCGAT ATAGGTTTTA GCAGTGAAAA AAATCATGGC
TCAAGTTTTT GGTTTACTTT CCAATGTGAG ATTAATGCAA TGCCGTTAAT GTTGGAATTA
GATAATCAGC ATTTAGCCAA TAAAACGGTA CTCTACTTTG AAGAAAATAA TCATAGTAGA
GAAGCAACCA AAAACTTGTT AAAGCACTGG AAAATGCGTG TTACTAGTGT AATAAATAGA
CATGAATTAT CACAAGTACT CTCACATAGC AGTCAGACCC AACGAGGTTT TGACTATGCA
CTTATAGGCC ATAATCAAAC AGCAACAGCA CTAAGTGAAT TGAAGAAAAC GATTGCACAA
GTACAGCCAA TTTCCAGCAA TATCCACTTA GCTTTAAATA ATACATCACC AAGCTTGCAA
GAGGCCTTGA TTGCCAGCGG TGCAATAAGT TGTATGAGTA AACCTCTATC ACCAACAACC
TTAAGCCGAG TACTACAGCC AGTTATGGAA ACTAAGGCCG AAAAGCTCAC TTTGAATGCA
GCTATGGATA AAGTATTACC GATAAAAGTA CTAGCTGTTG ATGATAATGA GGCTAACTTA
AAATTAATTA AGGCATTGCT GTTAGAGCAA GTAGCTGAGG TTGTTGAAGC CGACAATGGC
ATGTCAGCCG TAGAACTTTG TAAAGTAGAA AATTTTTCTT TAATTTTCAT GGATATTCAA
ATGCCGATTA TGGACGGCAT TAGTGCTCTA AAAGAAATAA AACAGTTAAC TAACAATAAT
AACACTCCCA TCATAGCCGT TACTGCACAT GCATTGAGTG GTGAAAGAGA AAAAATGCAT
CAACAAGGCT TTAATGCTTA CATGACAAAA CCAATAGATG AAACGATGTT ACGTCATATT
ATTTATGAAT ATTGCGATTT CGATCACCTA GTCAATTCAA CGGTTCCGGT CATTTCAACT
GATGTTATTA ACCAGGTTGA GTCTGCTTCA AAGGTAATTG ATTGGCCTTT AGCACTAAAG
CGTAGCGCCA ATAAAGCTGA TTTAGCCAAA GAGATGTTAT TAGGTTTAGT CGAAAGTTTA
CCCGAAACTC AACTCAGCAT CCGTGAAGCA ATTGACGTTC AAGATATCGC TCAAATAAAA
CGTCTGGTTC ATAAACTCAA TGGCGCTTGT TGTTATACTG GAACCCCAAA TTTAGCCAAA
ATCACTATTC AATTAGAAAC CCAATTAAAA ATGGGCTTGA GTACTGAAGA GCTTGAACCT
GAGTTTTTAG AGTTTTTCGA ACATATAGAG CAGGTATTAT TTGCCGTACC TGAAGCGCTA
AAAGAAATGA GTGAAAATAG TCATTAG
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| Protein sequence | MHKISLKDWV IILTIIPTTL IGFGLASYFS YSRSVELNDF LEQRAKSIIE PIAIASKDPL
LSKNRDKLRQ LIGFTHRNQS SIVKSIVIFT EDNQVFVTSA YHGDTNLMRL KAGVELPHHT
NTETLSDYII FRTPIIDENY NNQSNANITA MASSEYNYAT NNSKPVIIGY IAMQIDKSHL
NFQQQSQFIV AFAFALLGSL LSAIFAIRLI KKVTKPINSM VQAIERIREG KLESRVSGQL
IGELNFLKNG INAMAQSLDG YQNEMQASID QATIDLRESL EQFEIQNVEL SISKRKAQEA
NRVKSEFLAN MSHELRTPLN GVIGFTRQVL KTPLTENQRD YLQTIDRSAN NLLTIINDIL
DFSKLDAGKM VTENIPFSLR ESIDETLTLL APSAHKKNIE LSINLPQELP DSLVGDTMRI
KQIITNLVSN AIKFTPQGSV AVDITSEEIS QNNIKLKVIV TDTGIGMTTN QQRTIFDAFT
QADQSITRLY GGTGLGLVIC QRLAQEMNGD IGFSSEKNHG SSFWFTFQCE INAMPLMLEL
DNQHLANKTV LYFEENNHSR EATKNLLKHW KMRVTSVINR HELSQVLSHS SQTQRGFDYA
LIGHNQTATA LSELKKTIAQ VQPISSNIHL ALNNTSPSLQ EALIASGAIS CMSKPLSPTT
LSRVLQPVME TKAEKLTLNA AMDKVLPIKV LAVDDNEANL KLIKALLLEQ VAEVVEADNG
MSAVELCKVE NFSLIFMDIQ MPIMDGISAL KEIKQLTNNN NTPIIAVTAH ALSGEREKMH
QQGFNAYMTK PIDETMLRHI IYEYCDFDHL VNSTVPVIST DVINQVESAS KVIDWPLALK
RSANKADLAK EMLLGLVESL PETQLSIREA IDVQDIAQIK RLVHKLNGAC CYTGTPNLAK
ITIQLETQLK MGLSTEELEP EFLEFFEHIE QVLFAVPEAL KEMSENSH
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