| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4083 |
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| Symbol | prfB |
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| ID | 3522139 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4297120 |
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| End bp | 4298218 |
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| Gene Length | 1099 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286526 |
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| Product | peptide chain release factor 2, programmed frameshift |
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| Protein accession | YP_270738 |
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| Protein GI | 71281667 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.963626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAAA CAAACCCTAT ATTAAGTAAA TTAAAAGAAA TCCGTGAGCG CGCTAATTTG
CTTCGGGGGT ACCTTTGACT ACGATGTTAA AGCGGAACGT TTAGTTGAAG TTTCTCGCGA
ACTAGAGCTC CCTGATGTTT GGAATGAGCC AGAACGTGCT CAAGCCCTTG GTAAAGAGCG
AAGTTCTTTA GAAGAAGTGG TTAATACCAT TGTTGAACTC GAAACGGGTT GTGAAGATAT
TGAAGGTTTA GTTGAACTGG CTGTAGAAGA ATCAGACCAA GAAACTTTTG ATGATGCTGA
AGTTGAAGCT GATGCTTTAG ATAAGGTGTT AGAAAAACTA GAATTTCGCC GAATGTTTTC
TGGCGAACAA GATGCTAATA ATAGCTATTT GGATATTCAG TCAGGCTCAG GCGGTACAGA
AGCGCAAGAT TGGGCAGAAA TGCTGATGCG CATGTATTTA CGTTGGGGCG AAGCACACGG
CTATAAAACT GAAGTGATTG AAGTGACCGA TGGGGATGTT GCCGGAATAA AAGGTTGCAC
CATTAAGTAT ACCGGTGAAT ACGCTTATGG TTGGTTACGT ACTGAAACGG GTGTACATCG
TTTAGTGCGA AAATCACCAT TTGACTCTTC AGGTCGTCGT CATACCTCAT TTGCTTCAGC
GTTTATTTAC CCTGAAATTG ATGACAATAT TGAAATTGAT ATCAACCCTG CAGATTTACG
TATTGATACT TTTCGTGCTT CTGGCGCTGG CGGACAACAT GTAAATAAAA CTGATTCAGC
TATTCGTATT ACCCATGAGC CTACAGGGGC CGTGGTTGCT TGTCAGGCAG ATCGTTCTCA
GCATAAAAAT AGAGCGACGG CGATGAAGCT ACTGAAAGCT AAATTGTATG AAATGGAAAT
GCAAAAGCAA AACTCAGATA AACAAGTATT AGAAGATGGC AAATCAGATA TAGGTTGGGG
CAGTCAAATT CGCTCGTACG TATTAGATGA TAGCCGTATT AAAGATTTAC GCACGGGTGT
TGAGAATCGT AATACCCAAG CTGTATTAGA TGGTGATTTA GATAAGTTTC TAGAAGCCAG
TTTAAAGTCT GGTTTGTAG
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| Protein sequence | MFETNPILSK LKEIRERANL LRGYLDYDVK AERLVEVSRE LELPDVWNEP ERAQALGKER
SSLEEVVNTI VELETGCEDI EGLVELAVEE SDQETFDDAE VEADALDKVL EKLEFRRMFS
GEQDANNSYL DIQSGSGGTE AQDWAEMLMR MYLRWGEAHG YKTEVIEVTD GDVAGIKGCT
IKYTGEYAYG WLRTETGVHR LVRKSPFDSS GRRHTSFASA FIYPEIDDNI EIDINPADLR
IDTFRASGAG GQHVNKTDSA IRITHEPTGA VVACQADRSQ HKNRATAMKL LKAKLYEMEM
QKQNSDKQVL EDGKSDIGWG SQIRSYVLDD SRIKDLRTGV ENRNTQAVLD GDLDKFLEAS
LKSGL
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