| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4056 |
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| Symbol | |
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| ID | 3521694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4267261 |
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| End bp | 4268808 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637286500 |
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| Product | NCS1 nucleoside transporter |
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| Protein accession | YP_270712 |
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| Protein GI | 71281223 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGA GCAACAGTAA TTTAAATTCT TCGTCAGTCG TTCAGGTTGG CGAATTTTAT
GAGCTAGAAG TGGGCAAAGA TGTCCAGGAT AGTGATCACT ATAATGAAGA TATGGCCCCG
ACGAGTGTGA AAGACAGGAC TTGGAATACC TGGAATGTCG CGGCGTTGTG GGTGGGCATG
GCAATTTGTG TGCCGACCTA TACCCTAGGG GGGGTCTTGA CGGCTTATTT CGGTTTGAGT
GTAACTGAAG CGCTGATCAC CATATTACTG GCAAATATCG TAGTATTGAT TCCCTTGACC
CTTAATGCGT ATCCTGGTAC AAAATATGGC ATTCCTTTCC CGGTATTATT ACGTTCTTCC
TTTGGTATCA AAGGCTCCAA TATTCCCTGT ATGATCCGAG CGCTAGTCGC CTGTGGCTGG
TTTGGGATCC AAACCATGTT TGGCGGCGTC GCTATTCATA TTTTGATGTC AAATCTGTTT
GAGTCCTGGG CGACCTTGGG AGGAACGGGT GAGGTTTTTG GCTTCTTTAC TTTTCTCGCT
ATTAACCTGT TTATCGTTAT CAAGGGCTCC GAATCAATTA AGATCCTTGA AACCGTTGCC
GCACCGCTGT TGCTTGCGGT AGGTATTGGT CTGATGATGT GGGCCTATCC ACAGATCTCT
GTGACTGAAA TTCTAGCCAC ACCCGCTAAC CGTCCTGAAG GTGCATCATT CTGGGGTTAC
TTCTTTGGCG GGTTAACTGC GATGGTTGGT TTTTGGGCAA CCTTGTCGCT GAACATTCCG
GATTTTAGTC GTTATGTTAA GTCACAGAAA TCACAAATCG CAGGCCAAAT CATAGGCCTG
CCAGCTACCA TGTTCTTCTT TTCCGCTTTA GGGGTAGTCT TGACTGCCGC TTCAACGACC
TTGGTTGGTG AAACTATCTC TGATCCAATT AACCTTATTG GCAAAATCGA CAGCCCAGTA
TGGGTGGTGA TTGCAATGGT GATGATTATT ATCGCGACGC TGTCGACTAA TACTGCCGCC
AATGTTGTGT CACCTACCAA TGATTTTCAG AACCTAGCAC CCAAGAAGAT TAGTCAAACA
CGCGGTGTAT TACTGACTGG TCTGCTGGGT GTGTTACTGA TGAGCTGGGA GCTGCTTAAA
AAACTGGGTT GGATTGAGTC TGATGTTAGT GTTGAAGCCA TGTACACCGG CTGGTTATTG
GGCTACTCCA GTTTGCTGGG GCCGATAGCC GGGATCATGG TGGTCGATTA CTTTATTATC
AAAAAACAGC GTCTGGAATT GGCAGAGCTC TATAAATCAG AGGGTATTTA CGGTGGCTTC
AATAAAGCTG GACTGCTTGC TTTCGGAATC CCTGTCACCT TGACGCTCAT TGCGATAACT
ACAGGCATGT TCTCCTGGTT TTATCAATTC GGTTGGTTCA CTGGGTCTAT TATGGGTGGT
GTGGTGTATT TCATCGCCGC CAGCAAACAG CAAGCAGAAA GTAGTGTTGG GATCCAGCAA
ACAGCGTCGG ATGCCAGCGA ACTGAAAAGC CTGAGAAACA ACGCATAA
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| Protein sequence | MKMSNSNLNS SSVVQVGEFY ELEVGKDVQD SDHYNEDMAP TSVKDRTWNT WNVAALWVGM
AICVPTYTLG GVLTAYFGLS VTEALITILL ANIVVLIPLT LNAYPGTKYG IPFPVLLRSS
FGIKGSNIPC MIRALVACGW FGIQTMFGGV AIHILMSNLF ESWATLGGTG EVFGFFTFLA
INLFIVIKGS ESIKILETVA APLLLAVGIG LMMWAYPQIS VTEILATPAN RPEGASFWGY
FFGGLTAMVG FWATLSLNIP DFSRYVKSQK SQIAGQIIGL PATMFFFSAL GVVLTAASTT
LVGETISDPI NLIGKIDSPV WVVIAMVMII IATLSTNTAA NVVSPTNDFQ NLAPKKISQT
RGVLLTGLLG VLLMSWELLK KLGWIESDVS VEAMYTGWLL GYSSLLGPIA GIMVVDYFII
KKQRLELAEL YKSEGIYGGF NKAGLLAFGI PVTLTLIAIT TGMFSWFYQF GWFTGSIMGG
VVYFIAASKQ QAESSVGIQQ TASDASELKS LRNNA
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