Gene CPS_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3838 
Symbol 
ID3521277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4003130 
End bp4004128 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content41% 
IMG OID637286284 
Productquinol oxidase, subunit II 
Protein accessionYP_270500 
Protein GI71280808 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.156054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAG CTAATTCACT GGCGGTAATT TTTGTTTCAC TGATGGGATT TTCTATCTTG 
TTATACGCCA TTTTAGATGG TTATGACCTA GGTGTTGGTA TACTGCTGCC ACTAACACAA
AAAGATGATA GCGATACTAT GATCGCCTCA ATAGGGCCTT TTTGGGATGC TAACGAAACT
TGGCTAGTAC TAGCAATTGG TTTGTTATTA ATTGCTTTTC CTGCAGCCCA TAGTCATATA
TTTAAAGAAC TCTATTTACC AACCGCGGTT TTATTAATTA GCTTAGTATT GCGCGGCGTG
GCATTTGATT TTAGAGCTAA GGCGGCATTT AGCCACAAAC CTACCTGGAA CAAAGTATTT
AAGGTGGGCT CATTACTTGC TGCCATGAGC CAAGGTTATA TGCTTGGTAT GTATGTGATG
GGCTTTGAAG ACACACTAGC TGCTTATGTT TTTAGTTTAC TGAGTGCTTT TGGTGTCGCT
GCAGCATATG CTTATATTGG TGCCTGTTGG TTAATCATGA AAACAGAGGG CGCGTTACAA
GTTCAAGCAG TTAACTGGGC CAAAAGGACT GGGATTCTAT GTTTTATTGG CGTAGTAGCG
GTTTCTGCAG TAAACCCATT AATTAACCCT GATGTCTACG CGAAATGGTT TGCTTGGCCC
ACAACCTTAT ATATTTTACC TTTGCCAATA CTGTGCTTTG CCTTATTTGT TTATAGTCAA
CAGCAGCTAA AACTCTTACC AGCTCAAAAT GATAAAGGTT GCTGGCGACC GTTTGTTGCC
GCTGTCATTA TTTTTGCCTT ATGCTTTTTT GGCTTAGCTT TTAGCTTCTT CCCTTACATT
GTGCCGGGTA AGTTAACCAT TTGGCAATCT GCAGCAGCGC CCGAGTCACT AAGCTTTATT
CTTTGGGGAG CAATCATAGT AGTCCCTGTG ATCATCAGTT ATACCGTATT TTCATATCGT
GTATTTTGGG GAAAGGTGCA GGAGTTGAGA TATCATTAA
 
Protein sequence
MFEANSLAVI FVSLMGFSIL LYAILDGYDL GVGILLPLTQ KDDSDTMIAS IGPFWDANET 
WLVLAIGLLL IAFPAAHSHI FKELYLPTAV LLISLVLRGV AFDFRAKAAF SHKPTWNKVF
KVGSLLAAMS QGYMLGMYVM GFEDTLAAYV FSLLSAFGVA AAYAYIGACW LIMKTEGALQ
VQAVNWAKRT GILCFIGVVA VSAVNPLINP DVYAKWFAWP TTLYILPLPI LCFALFVYSQ
QQLKLLPAQN DKGCWRPFVA AVIIFALCFF GLAFSFFPYI VPGKLTIWQS AAAPESLSFI
LWGAIIVVPV IISYTVFSYR VFWGKVQELR YH