Gene CPS_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3799 
SymbolcvpA 
ID3522856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3961598 
End bp3962080 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content38% 
IMG OID637286246 
Productcolicin V production protein 
Protein accessionYP_270462 
Protein GI71282382 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTGGA TAGATTACGC CATTTTGGCC GTTATAGGCG TTTCAACACT AGTCAGTTTA 
ATACGAGGTT TTGTAAAAGA AGCAGTATCT CTAGTTATTT GGATCAGTGC CTTCTTTATT
GCCAGCACTT TTTACGCAAA CCTTGCCAAT CTTTTAACAA ATATTTCTGA TCCATTTTTG
CGTAATGCCG CAGCCGTCGC CATTCTTTTC ATATCAACCT TAGTGCTTGG TGCTTTGGTT
AATTATCTTA TTGGGCAATT GGTTAGCAAA ACAGGACTAT CTGGGACAGA TCGTGTTTTA
GGGCTTGTTT TTGGAGCACT TCGAGGTGTA CTCATTATCA GTGCAGTGAT ATTTTTTGTT
GATGCTTTTA CCGGAGCAGA AAATACACAG TGGTGGAAAA GCTCAGAATT GATCCCTGAG
TTTAAATTGG TAGTTGAATG GTTTTTTGAA TACCTTAAAG GGTCATCAAG TTATATAACT
TAG
 
Protein sequence
MVWIDYAILA VIGVSTLVSL IRGFVKEAVS LVIWISAFFI ASTFYANLAN LLTNISDPFL 
RNAAAVAILF ISTLVLGALV NYLIGQLVSK TGLSGTDRVL GLVFGALRGV LIISAVIFFV
DAFTGAENTQ WWKSSELIPE FKLVVEWFFE YLKGSSSYIT