Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3799 |
Symbol | cvpA |
ID | 3522856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3961598 |
End bp | 3962080 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286246 |
Product | colicin V production protein |
Protein accession | YP_270462 |
Protein GI | 71282382 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTGGA TAGATTACGC CATTTTGGCC GTTATAGGCG TTTCAACACT AGTCAGTTTA ATACGAGGTT TTGTAAAAGA AGCAGTATCT CTAGTTATTT GGATCAGTGC CTTCTTTATT GCCAGCACTT TTTACGCAAA CCTTGCCAAT CTTTTAACAA ATATTTCTGA TCCATTTTTG CGTAATGCCG CAGCCGTCGC CATTCTTTTC ATATCAACCT TAGTGCTTGG TGCTTTGGTT AATTATCTTA TTGGGCAATT GGTTAGCAAA ACAGGACTAT CTGGGACAGA TCGTGTTTTA GGGCTTGTTT TTGGAGCACT TCGAGGTGTA CTCATTATCA GTGCAGTGAT ATTTTTTGTT GATGCTTTTA CCGGAGCAGA AAATACACAG TGGTGGAAAA GCTCAGAATT GATCCCTGAG TTTAAATTGG TAGTTGAATG GTTTTTTGAA TACCTTAAAG GGTCATCAAG TTATATAACT TAG
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Protein sequence | MVWIDYAILA VIGVSTLVSL IRGFVKEAVS LVIWISAFFI ASTFYANLAN LLTNISDPFL RNAAAVAILF ISTLVLGALV NYLIGQLVSK TGLSGTDRVL GLVFGALRGV LIISAVIFFV DAFTGAENTQ WWKSSELIPE FKLVVEWFFE YLKGSSSYIT
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